Gene Information

Name : Dgeo_2416 (Dgeo_2416)
Accession : YP_593924.1
Strain :
Genome accession: NC_008010
Putative virulence/resistance : Virulence
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 70652 - 72205 bp
Length : 1554 bp
Strand : -
Note : -

DNA sequence :
ATGACCACGATCTCTCATCCCAACCATGAGCTGGCCCGGCAACTGCGGGAAAGCAGGCTGAAGGGCGGCCTGAAGCACTT
CATCGGCGGCGAGTGGGTGGACTCGCTGAGCGGCGAGACCTTCGAGACGCACACCCCCACCGACAATTCGGTGCTGGCGA
CGGTGGCGAGCGGCGACGCGGCGGACATCGACCGGGCCGCCCGCGCGGCCTCCGAAGCCTTCCAGACTTGGCGGGAGGTG
AGCGGGATGGAACGCCGGAGGCTCCTGCACCGCGTGGCCGACCTGATCGAGAAGCGTTCGCAGGAAATCGCCCTGCTGGA
GAGCGTGGATACTGGCCAAGCCATCCGCTTCATGAAGTCGGCGGCGGCGCGGGGCGCGGAGAACTTCCGTTTCTACGCGG
ACCGCGCGCCCGGTGCGGCCGACGGGCAGAGCCTCCCCGCGCCCGGGTTCCTGAACTACACGTTGCGCCAGCCCATCGGC
CCAGTCGGGGTGATCACGCCCTGGAACACGCCCTTCATGCTGTCCACCTGGAAGATCGCCCCGGCCCTCGCCGCAGGCTG
CACCGTCGTCCACAAGCCCGCCGAATGGAGTCCGGTCACCGCCACGCTGCTCGCGGAGATCATGGACGAGGCGGGCATTC
CCAAGGGCGTGGTGAACCTCGTTCACGGCTTCGGAGAGACGGCAGGTAAGGCATTGACCGAGCATCCGCTCATCCAGGCG
ATCGCCTTTGTGGGCGAGACGACCACCGGCAGCCACATCATGCGGCAGGGCGCGGACACGCTGAAGCGCGTGCATTTCGA
ACTGGGCGGCAAGAACCCGGTCGTGGTGTTCGACGACGCGGACCTCGACCGGGCACTCGACGCCGTCGTCTTTATGATCT
ACAGCCTGAACGGCGAGCGCTGCACCTCTTCCAGCCGCGTGCTCATCCAGGAAGGCATCTACGACGAGTTCACCGCCCGC
ATTGCCGAGCGCGCGCGGAACATCCGCGTCGGCGATCCGCTCGACCCGACCACCGAGATTGGCCCGCTGGTCCATCCCCG
CCATCTCGAGAAGGTGATGGGCTACTTCGACAGGGCGCGTGAAGAAGGCGCGACCGTCGCGGCGGGCGGCGAGCGCGTGG
GCGAAGGGGGCAACTACGTCGCCGCCACCCTGTTCACTGGGGCCAGAAACGACATGCGAATTGCCCAAGAGGAAATCTTC
GGCCCAGTCCTGACCGCTATTCCCTTCCGCGACGAGGCCGAAGCCCTTCAGCTCGCCAACGATGTGAAGTACGGCCTCGC
CGGGTACCTGTGGACGAATGACCTCACCCGCGCGCACCGCTTCGCGCAGGCTCTCGAGGCCGGGATGGTCTGGGTGAACA
GTGAAAACGTGCGCCACCTGCCGACCCCCTTCGGGGGCATGAAGGCCAGCGGCATTGGCCGCGACGGCGGCGACTACTCC
TTTGATTTCTACATGGAGACAAAAAACATCGCGATTTCGCTGGGAACGCACAGGGCGGCGCAGTTGGGGGTAGGGCAGCC
GGTGAAGGTGGACCGGCGGGAGGTGGAGGGATGA

Protein sequence :
MTTISHPNHELARQLRESRLKGGLKHFIGGEWVDSLSGETFETHTPTDNSVLATVASGDAADIDRAARAASEAFQTWREV
SGMERRRLLHRVADLIEKRSQEIALLESVDTGQAIRFMKSAAARGAENFRFYADRAPGAADGQSLPAPGFLNYTLRQPIG
PVGVITPWNTPFMLSTWKIAPALAAGCTVVHKPAEWSPVTATLLAEIMDEAGIPKGVVNLVHGFGETAGKALTEHPLIQA
IAFVGETTTGSHIMRQGADTLKRVHFELGGKNPVVVFDDADLDRALDAVVFMIYSLNGERCTSSSRVLIQEGIYDEFTAR
IAERARNIRVGDPLDPTTEIGPLVHPRHLEKVMGYFDRAREEGATVAAGGERVGEGGNYVAATLFTGARNDMRIAQEEIF
GPVLTAIPFRDEAEALQLANDVKYGLAGYLWTNDLTRAHRFAQALEAGMVWVNSENVRHLPTPFGGMKASGIGRDGGDYS
FDFYMETKNIAISLGTHRAAQLGVGQPVKVDRREVEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-90 48
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-65 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-70 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dgeo_2416 YP_593924.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase VFG0082 Protein 4e-70 41