Gene Information

Name : Dgeo_2537 (Dgeo_2537)
Accession : YP_594045.1
Strain :
Genome accession: NC_008010
Putative virulence/resistance : Unknown
Product : IstB-like ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 510912 - 511712 bp
Length : 801 bp
Strand : +
Note : -

DNA sequence :
ATGATCGCGGTCGAACGCTGCCGAACGGATCTGGAAGCGTTGGGCTTGCCGCATGCGGCAAGCCTGCTGGAGAGCCGCCT
GGACGCAGCGGCCAAGAAGGAGCTGCCCTATGCGGACTTCTTGGCCGACCTGCTGCGGATCGAGGTGGTGGCTCGGGAGG
ACGAAGGCCGTGCCCGACGGTTAAAACAGGCCCGTTTGCCTTTTATGCGGACCCTGGATCAGTTCGACTTCGCCTTCCAG
CCGAGCGTGGACAAGCGGCTGGTCAAGGAACTGGGAACGCTGTCCTTCGCCGCCGATGGGCAGAACGTCATTCTGTTGGG
GCCGCCTGGGGTCGGGAAGACCCACCTGGCTGTAGGACTCTGCACGACCGCAATCAACCACGGGGAGAGTGTGCTATTTG
TGCGGGCGGGGCAGTTGATGGAGGACCTGCGCAAAGCGCAGGCCCTGAATCGACTGGAACACCGGCTGCGGTACTACGCC
AAGCCCAAGCTGCTGGTCATCGACGAGTTCGGCGTCTGGCCCTATGACCGCCTGGCCGCCAATGCCCTGTTCGGCCTGAT
CGCGGCCAGGTACGAGCGAGGCAGCGTGATCCTGACATCGAACAAGGGCTTCGCGGATTGGGGCGAGGTGCTGGGGGACC
CGGTGGTGGCGAGTGCGATCCTGGACCGGCTGCTGCATCACAGCCACGTGTTGAACATCAAGGGTGAGTCGTATCGCCTG
CGGGAGAAGAAGAAATCCGGTCTGTTCCCCAGTGCGTTAGTGGGGATCGGCGAGGCGAGTCAGGAGGTGAAACGGCCTTG
A

Protein sequence :
MIAVERCRTDLEALGLPHAASLLESRLDAAAKKELPYADFLADLLRIEVVAREDEGRARRLKQARLPFMRTLDQFDFAFQ
PSVDKRLVKELGTLSFAADGQNVILLGPPGVGKTHLAVGLCTTAINHGESVLFVRAGQLMEDLRKAQALNRLEHRLRYYA
KPKLLVIDEFGVWPYDRLAANALFGLIAARYERGSVILTSNKGFADWGEVLGDPVVASAILDRLLHHSHVLNIKGESYRL
REKKKSGLFPSALVGIGEASQEVKRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAA21402.1 - Not tested HPI Protein 5e-40 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-39 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 4e-40 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 4e-40 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 4e-40 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 4e-40 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 4e-40 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-40 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 5e-40 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-40 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-40 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dgeo_2537 YP_594045.1 IstB-like ATP-binding protein VFG1606 Protein 2e-40 42
Dgeo_2537 YP_594045.1 IstB-like ATP-binding protein VFG1663 Protein 1e-39 42
Dgeo_2537 YP_594045.1 IstB-like ATP-binding protein VFG1515 Protein 2e-40 42
Dgeo_2537 YP_594045.1 IstB-like ATP-binding protein VFG1627 Protein 2e-40 42