Gene Information

Name : Acid345_4669 (Acid345_4669)
Accession : YP_593743.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 5525299 - 5526828 bp
Length : 1530 bp
Strand : -
Note : -

DNA sequence :
ATGACTTTCTCGTATAACGCCTTCACCGAGCCCGCCGGCGAACACACCGCCACTCATCGCCGTGCCAAGATCGTTTGCAC
CATCGGCCCCGCCTGCAATACCGAGGCCGCGATGCAGGAGCTGATGCGCGCCGGCATGGACGTCGCTCGCTTGAATTTTT
CGCATGGTACGCACGACGAGCATCTCGTGGTCATCCAGCGCCTGCGTAAAGTTGCGGCCGAGGAGCAGCGCTCTATCTGC
ATCCTGCAAGACCTGCAAGGTCCCAAGATCCGCACCGGATTGCTCAAAGATCACAAGCCCGTGATGCTCGAAACCGGCAA
CACGGTCACGATCACGCCGCGCGACATTGTCGGCGATGCCTCGCTGCTCGCAACCACCTTTCAAACCCTCGCCCTGGATG
TGCAGCCTGGCTCGCGCATCCTGCTCTCCGACGGCAAGATTGAACTCAGCGTCAGTCGCATCGAAGGCGCCGATGTCGAG
TGCCACATCGTGAACGGCGGCGAACTCAAGGAGCACCAGGGCATCAACATTCCCGGCGCGATCCTCAGCATTCCTGCGCT
CACCAATAAAGACCTCGAAGATCTCGCGTTCGGTCTGAAAAACGGCGTGGATGCCGTTGCCATCTCATTCGTGCGCACCG
CCAACGATCTCAAGCAAGTGCGCAACGCGATCTCCGAGCACCAGGGCAATGTCTTCGTCATCGCTAAGCTCGAAAAGCCC
CAAGCTATCGAGCACTTGGAAGAGATCTTCAATGAGACCGACGGTGTCATGGTTGCGCGCGGCGATCTCGGCGTCGAAGT
GCCGCCCGAAAAAGTGCCAGTCCTTCAGAAGCACATCATCAAGCGCTCGCAGAGCCGCCGCATTCCCGTCATCACCGCGA
CACAGATGCTGGAGTCTATGATCGACAATCCGCGCCCAACGCGCGCCGAAGCCAGCGACGTGGCCAACGCCATCTTCGAC
GGCACCGATGCCGTCATGCTCTCGGGCGAGACCGCCAGCGGCAAGTATCCCCGCGAAGCCGTGGCGATGATGGCACGCAT
CATTACGGAAGCCGAGTCGCACTGCCTCGCCGAGGGCCGTCGCCGCCGTCACGAAGACCACAAGAACACCATCTCTGAGG
CCGTGTGCGATGCGGTTTCGCACGCCGCCGAAGACCTCGACATGCTCGCGATCGCCATCTATACCGAATCGGGCAACACG
GCGCGCATCCTCTCCAAGCATCGCCCCAAGCCGCCGATCTACGCCTTCTCGCACCTCGACACCGTGATCAACCGCCTGAA
CCTGTTTTGGGGAGTGCATCCGGTACAGTGCGAGCCTTTGCGTTCCTCAAAAGAAATGATTCTCTACGCCGAACAGTTAC
TTCTCGGTGCCCACCAGGTGGCTGCGGGAGATATCATTGGAGTCGTTGCGGGCACGCGTTCCACATCAGGTTCTACGAAC
TTCATGCGCCTGCACGTGATTGGCAGCGAGTCCGAGGAAGAGCGACCGCCCGCGGAGAACGCGCCGCCGATGAAGAAAGA
GATTCGATGA

Protein sequence :
MTFSYNAFTEPAGEHTATHRRAKIVCTIGPACNTEAAMQELMRAGMDVARLNFSHGTHDEHLVVIQRLRKVAAEEQRSIC
ILQDLQGPKIRTGLLKDHKPVMLETGNTVTITPRDIVGDASLLATTFQTLALDVQPGSRILLSDGKIELSVSRIEGADVE
CHIVNGGELKEHQGINIPGAILSIPALTNKDLEDLAFGLKNGVDAVAISFVRTANDLKQVRNAISEHQGNVFVIAKLEKP
QAIEHLEEIFNETDGVMVARGDLGVEVPPEKVPVLQKHIIKRSQSRRIPVITATQMLESMIDNPRPTRAEASDVANAIFD
GTDAVMLSGETASGKYPREAVAMMARIITEAESHCLAEGRRRRHEDHKNTISEAVCDAVSHAAEDLDMLAIAIYTESGNT
ARILSKHRPKPPIYAFSHLDTVINRLNLFWGVHPVQCEPLRSSKEMILYAEQLLLGAHQVAAGDIIGVVAGTRSTSGSTN
FMRLHVIGSESEEERPPAENAPPMKKEIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-78 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-78 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-78 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-78 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_4669 YP_593743.1 pyruvate kinase VFG0479 Protein 5e-79 42