Gene Information

Name : Acid345_4223 (Acid345_4223)
Accession : YP_593297.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Unknown
Product : primary replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 5005353 - 5006723 bp
Length : 1371 bp
Strand : -
Note : -

DNA sequence :
ATGGCAACCGTCAATCAAAGTTTGGATCGTGGGCTTCCCGCCGCCATCGACGCTGAGAAGTCAATCCTCGGCGCCATCCT
TCTCGAGAACAGTACATACGACCAGACCACCGGGCTAAAGTCTGAGGATTTTTATCTCGACGGGCACCGGCGCATCTTCG
GGGCGATGATCGACCTGCGCGAGACGTCGCGGGCGATCGACATCATCACGATCACGGATGAGTTGGGCCGGCGTAAAGAC
CTTGAGGCGTCGGGAGGTGTGGCGTATATCGCGTCGCTGACGGACGGAGTGCCGCGGCGGCCGAGCATCGAGCAGTACGT
CAAGATTGTGCGCGATAAATCGATGCTGCGGGCGCTGATTCATGCCTGCAATAACACGATGTCGCAGGCCATCGACCAGG
CCGACTCGGTCGAGGACATTCTTGACCAGGCTGAAGCAAACGTCTTCGCGATTTCCCAGGGCCGGGTCAGCAACGACTTC
AAGGACATCGCTTCGATCGTGAAGGATTCGTTCGGGTCGGTGGATGCGCTGCTGAAGCGTGGGCAACGCATTACGGGACT
GGAGACGCACTTCGCCGATCTTGATGGGCTCACCAGCGGGTTCCAGCCATCGGATTTGATCATCATCGCCGCGCGTCCTT
CGATGGGCAAGACCGCGTTTGCGATGAACATTGCCGAGAATGCGGCAGTCATGGACGGCAAGGTCGTCGGCATCTTCTCG
CTGGAAATGTCGCGTGAAGCGCTGCTGCTACGTATGTTGTGTTCGCAGTCGCAGGTGAACTCTCACAACATGCGCACCGG
GTTCCTCGGCAGGGAGGACATCGGCAAACTGCAGGGTGGCTTGGAACGGCTGCTGCGAGCGCCGTTGTACATCGACGACA
CGCCGGGAATTTCCGTGAGCGAAATGCGGGCGAAGGCGCGGCGACTGGCGCAGATGAGGGGTACGCTCGACCTGATCGTT
GTGGACTATCTACAGCTCATGTCCGGTACTCCGATAGGCGGCAAGCGATTTGAAAATCGCACTCAGGAAGTTTCGGCGAT
TTCGCGTGGTCTGAAAGCCGTAGCGAAGGAACTGCGGGTGCCGGTAGTCGCGCTTTCGCAGTTGAGCCGTGCGCCAGAGC
AGCGCGGCGGCAAAGACAACGAACCGAAACTTTCGGATTTGCGTGAATCGGGTTCGATCGAGCAAGACGCGGACGTAGTG
ATGTTTTTGTATCGTCCGGAATATTATGACCGCGAGAATGTGGACCTGGAAGGCATCGCGAAGCTGATCATCGGCAAGCA
GCGTAACGGCCCCACCGATACGGTGCAGCTGGCGTTCCAGAAAGAGTTCACCAAGTTCATGGATCTCGACCGGCAAGCTT
GGGTCAAGTAG

Protein sequence :
MATVNQSLDRGLPAAIDAEKSILGAILLENSTYDQTTGLKSEDFYLDGHRRIFGAMIDLRETSRAIDIITITDELGRRKD
LEASGGVAYIASLTDGVPRRPSIEQYVKIVRDKSMLRALIHACNNTMSQAIDQADSVEDILDQAEANVFAISQGRVSNDF
KDIASIVKDSFGSVDALLKRGQRITGLETHFADLDGLTSGFQPSDLIIIAARPSMGKTAFAMNIAENAAVMDGKVVGIFS
LEMSREALLLRMLCSQSQVNSHNMRTGFLGREDIGKLQGGLERLLRAPLYIDDTPGISVSEMRAKARRLAQMRGTLDLIV
VDYLQLMSGTPIGGKRFENRTQEVSAISRGLKAVAKELRVPVVALSQLSRAPEQRGGKDNEPKLSDLRESGSIEQDADVV
MFLYRPEYYDRENVDLEGIAKLIIGKQRNGPTDTVQLAFQKEFTKFMDLDRQAWVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-72 41
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 5e-65 41
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 5e-65 41
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-62 41