Gene Information

Name : Acid345_3758 (Acid345_3758)
Accession : YP_592832.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Unknown
Product : N-6 DNA methylase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 4440674 - 4442209 bp
Length : 1536 bp
Strand : -
Note : -

DNA sequence :
GTGGCCAACGGAACCATCTCAGAAATCGATGAGGCGAAGCTCTGGAGCATGGCAGATGCGCTGCGCAACAACATGGACGC
TGCGGAGTACAAACACGTCGTCCTCGGTCTTATCTTCCTGAAATACATCTCCGACGCCTTCGAGGCGAAGCACGCCGAAC
TTGAACAAAAGATGGATCAGGGGGCCGATCCGGAGGACCCCGATGAGTACCGCGCTGTCAGTATCTTTTGGGTTCCCAGA
GAAGCTCGTTGGGCACACCTGAAGGACAACGCTCCGCAACCCAAAATCGGGACGCTTGTCGATGATGCAATGGCGGCGAT
TGAGCGAGATAATCAGTCGCTGAAGGGCGTATTGCCGAAGGATTATGCCCGGCCTGGGCTAGACAAACAAAGGCTTGGGC
AATTGATCAATCTCGTGAGTGGCATCGGTCTTGGTACGCCCGCCGCCCGGGCCAAGGACATCTTAGGTCGCGTTTACGAG
TACTTCCTTGCTCAGTTTGCCAGCGCTGAAGGTAAAAAGGGCGGGCAGTTCTATACGCCCTCTCACGTCGTTCGAATCCT
CGTCGAGATGCTAGCTCCGTACAAAGGGCGAGTCTACGACCCATGCTGCGGATCAGGCGGCATGTTCGTCAGCAGCGAGA
AGTTCATAGAGGCTCACAGTGGAAAACTCGGCGACATCTCGATCTACGGTCAAGAATCGAATTACACAACTTGGCGCTTG
GCGAAGATGAATCTGGCGATTCGGGGCATCGATGCTCAAATCCAGCACGGCGACACTTTTCACAACGATCGCCACCCAGA
CCTGAAGGCCGATTGTGTTCTGGCAAACCCTCCCTTCAATGACAGCGATTGGCGCGGGGAACTGCTGAAGGAGGACAAGC
GTTGGGTCTTCGGTGTACCTCCGGCCGGTAACGCGAACTTTGCATGGATCCAGCACTTCATCTATCACCTCGCGCCGACC
GGCTTGGCGGGCTTCGTCCTCGCTAATGGCTCGATGTCCACGAATACCTCAGGGGAGGGTGAGATCAGGAAAGGCATCAT
CGAATCTGATCTCGTCGATTGCATGGTGGCACTCCCCGGACAGCTTTTCTATTCGACGGGCATTCCGGTTTGCCTTTGGT
TCGTCGCCCGGAGCAAGTCGAGTGGTCGGTTCCGTAACCGCAGGGGCGAAACGCTCTTCATCGACGCGCGAAAGTTCGGA
TCGCTGATTGATCGTGTGCACCGGGAATTAAGCGACGCGGATGTCGCCAAGATCGCCGGAACCTATCATGCGTGGCGTGG
TGATGAGGGCGCAGGAGGCTACGCCGATGTTGCGGGCTTTTGTAAGGCCGCAACGTTGGACGATATCCGGAAGCACAGTC
ACATCCTCACCCCGGGACGATATGTGGGTGCGAAGGAGACTGAAGATGACGGCGAACCAATTGAGCAAAAGATGAAGACT
TTGACGGACGCACTGCGCATGCAGTTAGCAGAGAGCAGAAAACTCGAAGGGGAGATAACCGGCAATCTCAAGGAAATAGG
TTATGAATTGGCCTAA

Protein sequence :
MANGTISEIDEAKLWSMADALRNNMDAAEYKHVVLGLIFLKYISDAFEAKHAELEQKMDQGADPEDPDEYRAVSIFWVPR
EARWAHLKDNAPQPKIGTLVDDAMAAIERDNQSLKGVLPKDYARPGLDKQRLGQLINLVSGIGLGTPAARAKDILGRVYE
YFLAQFASAEGKKGGQFYTPSHVVRILVEMLAPYKGRVYDPCCGSGGMFVSSEKFIEAHSGKLGDISIYGQESNYTTWRL
AKMNLAIRGIDAQIQHGDTFHNDRHPDLKADCVLANPPFNDSDWRGELLKEDKRWVFGVPPAGNANFAWIQHFIYHLAPT
GLAGFVLANGSMSTNTSGEGEIRKGIIESDLVDCMVALPGQLFYSTGIPVCLWFVARSKSSGRFRNRRGETLFIDARKFG
SLIDRVHRELSDADVAKIAGTYHAWRGDEGAGGYADVAGFCKAATLDDIRKHSHILTPGRYVGAKETEDDGEPIEQKMKT
LTDALRMQLAESRKLEGEITGNLKEIGYELA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 2e-156 61
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 3e-157 61
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 2e-155 61
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 3e-123 50