Gene Information

Name : Acid345_3727 (Acid345_3727)
Accession : YP_592802.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3604
EC number : -
Position : 4404309 - 4405337 bp
Length : 1029 bp
Strand : -
Note : -

DNA sequence : 
GTGGAATCGGACAACGAGGTTCGATCAAATGGGCAGCGCCCGGTCGAACGCAGATTTGAACAAATCATAGGCAAAAGTCC
CGCGTTGGAATCAGCATTTGCGGACGTGGAACAGGTAGCCCCGACTGATTCCACTGTGCTGATCCTGGGGGAGACCGGGA
CAGGTAAGGAGTTGATTGCTCGAGCTATTCACAATATCAGTCCTCGCTGCGGACGTCCGTTTGTAAAGCTGAATTGCGCT
GCTATTCCATTCGACCTTTTAGAAAGTGAGCTTTTCGGCCACGAAAAAGGTGCTTTCACCGGAGCGATCGCGCAGAAGAT
TGGACGTTTCGACATGGCAAACACGGGGACGCTCTTCTTGGATGAAATAGGAGACATTCCCCTGGCGTTACAGCCTAAGC
TCCTGCGTGTGCTACAGGAGCAGGAATTCGAGAGGCTAGGAAGTTGCCGTACCCATCGCGTTGATGTGCGCTTAGTCGCT
GCCACTCATCGCAATTTGATAGAAATGGTTAAACGGGCTGAATTCCGCAGTGATCTCTATTATCGTCTGAATGTTTTTCC
TGTCACTCTCCCAGCTCTCAGGGAACGCAAGGAGGACATCCCCCTACTTGTCGCTCATTTTGTTAAGGTTTTTGGGCAAC
GCATGGGCAAACGAATCCTTAATGTCCCGCAGAGCACGATGGACGCTTTAACGGAATATTCTTGGCCCGGCAACATTCGA
GAGCTACAAAATCTGGTGGAACGTGCCGTGATTCGATCGAACGACGGGTTGCTTCCGAATCCGCTACCTCAATCTGCGAA
TTATCAACACAACCAGTTCACTCAGGGCGTGTTCGCTGATTCTCAGCGGGAAGTGATATTGAAAATGTTAGATACGTGCG
GTTGGATTCTCGGGGGGTCCCGTGGAGCAGCCAGTCGGTTGGGACTAAAACGAACCACCCTAATCGCAAAAATGAAAAAG
CTCGGGATCTCAAGGCCCCTCTCCGAAAGCGATAGACCTCAACTGACTGAACAGCAAGAGAGCGATTAG

Protein sequence : 
MESDNEVRSNGQRPVERRFEQIIGKSPALESAFADVEQVAPTDSTVLILGETGTGKELIARAIHNISPRCGRPFVKLNCA
AIPFDLLESELFGHEKGAFTGAIAQKIGRFDMANTGTLFLDEIGDIPLALQPKLLRVLQEQEFERLGSCRTHRVDVRLVA
ATHRNLIEMVKRAEFRSDLYYRLNVFPVTLPALRERKEDIPLLVAHFVKVFGQRMGKRILNVPQSTMDALTEYSWPGNIR
ELQNLVERAVIRSNDGLLPNPLPQSANYQHNQFTQGVFADSQREVILKMLDTCGWILGGSRGAASRLGLKRTTLIAKMKK
LGISRPLSESDRPQLTEQQESD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS NP_791207.1 type III transcriptional regulator HrpS Virulence Hrp PAI Protein 2e-40 43
hrpS AAC34753.1 HrpS Virulence Hrp PAI Protein 2e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_3727 YP_592802.1 Fis family transcriptional regulator BAC0467 Protein 5e-68 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_3727 YP_592802.1 Fis family transcriptional regulator VFG1214 Protein 7e-54 41