Gene Information

Name : Acid345_0367 (Acid345_0367)
Accession : YP_589446.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 407706 - 408428 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGAGAACGGACGTGCACTGATCCAGATCCAGGATCTAACCAAGGTTTTCTACACCGATGAGATCGAAACCCATGC
ATTGTCGGGCGTGCATCTCGAGATCGAAAAGGGCGAATATGTCGCGATGTCCGGTCCGTCGGGCTGCGGAAAGTCCACGC
TGCTCTCGATCATCGGCTTGCTCGACACCCCCACCGGCGGCAAGTACTACCTGAACAACAAGCCCGTCGAGAACCTCGAT
TTCGCCGACCGGTCGCGCATCCGCAACCAGGAAATCGGCTTCATCTTCCAGAGTTTCAACCTCATCGGCGATCTCACCGT
TTATGAGAACGTTGAGCTGCCGTTGACCTATCGTCAGGGCATGGCGACGCCGAACCGCAAGCAGCGCGTGATGGAAGCGC
TCGAGCGCGTCGGCATGGCGCACCGCATCCGCCACTATCCATCGCAGCTCTCCGGCGGTCAGCAGCAACGTGTGGCTGTG
GCGCGCGCATTGGCCGGCAACCCGTCCATCCTGCTCGCGGACGAACCTACCGGAAACCTCGACTCGCGCAACGGCGAAGC
GGTGATGGAACTGCTCCAGAACCTGCATCGTGAAGGCGCGACCATCTGCATGGTGACGCACGATCCGCGTTTCGCGGCGC
ATGCGCAACGGCAGATTCATCTCTTCGACGGCAAGGTTGTCGCGGAAGAAGAGCTCAAGAAATTGACCCAGGAAATTCAC
TAA

Protein sequence : 
MSENGRALIQIQDLTKVFYTDEIETHALSGVHLEIEKGEYVAMSGPSGCGKSTLLSIIGLLDTPTGGKYYLNNKPVENLD
FADRSRIRNQEIGFIFQSFNLIGDLTVYENVELPLTYRQGMATPNRKQRVMEALERVGMAHRIRHYPSQLSGGQQQRVAV
ARALAGNPSILLADEPTGNLDSRNGEAVMELLQNLHREGATICMVTHDPRFAAHAQRQIHLFDGKVVAEEELKKLTQEIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_0367 YP_589446.1 ABC transporter ATPase NC_012469.1.7686878. Protein 7e-47 48
Acid345_0367 YP_589446.1 ABC transporter ATPase NC_008702.1.4606598. Protein 2e-36 48
Acid345_0367 YP_589446.1 ABC transporter ATPase CP001581.1.gene798.p Protein 3e-30 44
Acid345_0367 YP_589446.1 ABC transporter ATPase CP001581.1.gene598.p Protein 4e-30 43
Acid345_0367 YP_589446.1 ABC transporter ATPase NC_012469.1.7685735. Protein 5e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_0367 YP_589446.1 ABC transporter ATPase VFG2059 Protein 8e-11 41