Gene Information

Name : Acid345_3573 (Acid345_3573)
Accession : YP_592648.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4223414 - 4225870 bp
Length : 2457 bp
Strand : +
Note : -

DNA sequence :
ATGTTTGAACGGTATACAGAAAAGGCCAGACGAGTCATCTTCTTTGCGCGTTACGAAGCAAGTCAGTTCGGTTCGCCGTA
CATAGAGACCGAACACCTGCTCCTGGGGCTGCTGCGCGAAGACAAGGCGCTCACCAATCGGTTCCTCCGCCAGCATTCGT
CGGTGGAATCCATTCGGAAACAGATTGAAGGCCACACCACCATCCGGGAAAAGGTCTCGACTTCGGTTGATCTCCCCCTG
AGCAATGAGTGTAAGCGTGTGCTCGCCTATGCCGCGGAAGAGGCAGAACGTCTCTCCCATAAGCACATTGGCACCGAGCA
CCTGCTGCTGGGTCTGTTGCGCGAAGAGAAGTGCTTCGCCGCTGAGATCCTGCATGAGCGCGGTCTCCGTCTGGCTACTA
TCCGCGAGGAACTGGCACGTACCTCGCAGGAAAAGGCCCAACCACAACAGCGTCAGCAGCGTGAATCTTCGCTGCTCGCA
GAATTTTCCCGCGACCTGACTCAGGTCGCCATGGACAACCAGCTTGATCCGCTCGTCGGTCGCGACAGCGAGCTCGAGCG
CGTCATCCAGATCCTTTGCCGTCGCACCAAGAACAACCCGGTGCTCATCGGCGAACCTGGCGTTGGCAAAACTGCCATCG
TCGAAGGTCTCGCCCAGCGCATTGCTGACGGCGAAGTTCCATCGTTCCTGGCGGACAAGCGCATCCTCGCTCTCGATCTC
AGCTTGATCGTGGCGGGCACCAAGTATCGCGGACAGTTCGAAGAGCGTCTCAAGACCATCATGAAGGAGTTGATGGAGAA
CCAGAACGCCATCATCTTCATCGATGAGCTGCACACCCTCGTGGGTGCCGGCTCCGCCGAGGGTTCCCTCGACGCCGCCA
ACATCCTCAAGCCCGCGCTCTCTCGCGGCGAGATCCAGTGCATTGGCGCCACTACGCCCGGCGAATACCGGAAGTCGATC
GAGAAGGACCGTTCCCTCGAGCGCCGCTTCCAGGCCGTCAAGGTCAATCCGCCCGACGAAGAGACTGCCGTCAAAGTCCT
TGCTGGAATCAAGGACCGCTACGAGAAGTTCCACGCCGTCACTTATACCGACGACGCCATCACCTTCGCGGTCTATCACA
GCAACCGCTACATTCCCGATCGCTTCCTGCCCGATAAGGCCATCGACCTCATCGACGAAGCCGGTGCCCGCGTTAAGCTG
CGCCAGACTTCGCTTCCCGAAGAGATCACGGAAGTGCAGAAGCGCATCAAGTTCATCGTTCACCGCATGGAGAACGCCAT
TGCGAACCACGAGTTCGAAAAGGCGCGCTTCTACAGTGACGAGGAGCGCAAGGAACGCGAGAACCTGCGCGGCCTCCGCG
AAAAATATCACCTCGATGAGTCCTCTACCGGCGTAGTCGGCCGCGAAGACATCGAAGATGTCGTCTCCCGCTGGACCGGC
GTGCCCATCATGTCGATCAAGGAAGAGGAGACCGCCAAACTTCTTCGCATCGAAGAAGAGCTGCACAAGCGCGTCATCTC
GCAGGAGAAGGCAATCTCTGCCCTCGCCCGCGCCATTCGCCGCAGCCGTGCCGGCCTTAAGAGCCCGAACCGTCCCATTG
GTTCGTTCTTGTTCCTTGGCCCCACCGGCGTCGGCAAAACCGAAGTCGCGCGCACTCTTGCCCAGTTCATGTTCGGCAGC
GAGAAGAGCTTGATCCGCTTCGATATGTCCGAGTACATGGAAAAGCACTCGGTCTCGAAGCTGATCGGTTCGCCTCCGGG
ATACGTGGGCTACGAGGAAGGCGGCCAGCTCACCGAGCGCGTCAAGCGTTCCCCGTACTCGGTCGTCCTGCTCGACGAAA
TCGAGAAGGCGCATCCGGATGTCTTCAACATCCTGTTGCAGGTCTTTGAAGACGGCCAGTTGACCGATGGTCTCGGCAAC
ACCGTCGACTTCAAGAACTCGATCATCGTCATGACGTCGAACATCGGCGCGCGCCACCTGATGAAGCGCACCGGCCTCGG
CTTCCAGAGCGAGCAGACCGAGCAGATCGACAGCAAGGTAGAAGACATGGTCAAGGCCGAGGTGAAGAAAACCTTCAACC
CCGAGTTCCTGAACCGCCTGGATGAAGTCATCCTCTTCAACCCGCTGTCGGAAGGCGACCTGATCCAGATCGTCGAGCTC
ATGGTTGCGCAACTCAACGCCAACCTGGTGCAGAAAGCGATCACGGTAACGGTAGCCGAAGACGCCAGGAAGTGGATCCT
CGACAAGACGGTCACGGACCGCACCTACGGTGCCCGTCCGCTCCGCCGCGCCTTGCAGAAGTACATCGAAGACCCGCTCT
CGGAAGCGCTAATCCAGGGCCTAATCAGCATGCGCCCCGCGTTCTTAGAGGTCTACCTCGAGAACAACCAACTCTTCTAC
CGGCCTATTGCGGAAGGGGAAGAGAAACCTGAAGGTGTGCTGCTGTATAACGACTAA

Protein sequence :
MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALTNRFLRQHSSVESIRKQIEGHTTIREKVSTSVDLPL
SNECKRVLAYAAEEAERLSHKHIGTEHLLLGLLREEKCFAAEILHERGLRLATIREELARTSQEKAQPQQRQQRESSLLA
EFSRDLTQVAMDNQLDPLVGRDSELERVIQILCRRTKNNPVLIGEPGVGKTAIVEGLAQRIADGEVPSFLADKRILALDL
SLIVAGTKYRGQFEERLKTIMKELMENQNAIIFIDELHTLVGAGSAEGSLDAANILKPALSRGEIQCIGATTPGEYRKSI
EKDRSLERRFQAVKVNPPDEETAVKVLAGIKDRYEKFHAVTYTDDAITFAVYHSNRYIPDRFLPDKAIDLIDEAGARVKL
RQTSLPEEITEVQKRIKFIVHRMENAIANHEFEKARFYSDEERKERENLRGLREKYHLDESSTGVVGREDIEDVVSRWTG
VPIMSIKEEETAKLLRIEEELHKRVISQEKAISALARAIRRSRAGLKSPNRPIGSFLFLGPTGVGKTEVARTLAQFMFGS
EKSLIRFDMSEYMEKHSVSKLIGSPPGYVGYEEGGQLTERVKRSPYSVVLLDEIEKAHPDVFNILLQVFEDGQLTDGLGN
TVDFKNSIIVMTSNIGARHLMKRTGLGFQSEQTEQIDSKVEDMVKAEVKKTFNPEFLNRLDEVILFNPLSEGDLIQIVEL
MVAQLNANLVQKAITVTVAEDARKWILDKTVTDRTYGARPLRRALQKYIEDPLSEALIQGLISMRPAFLEVYLENNQLFY
RPIAEGEEKPEGVLLYND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-160 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_3573 YP_592648.1 ATPase AAA VFG0080 Protein 3e-145 52
Acid345_3573 YP_592648.1 ATPase AAA VFG0079 Protein 0.0 49