Gene Information

Name : Acid345_3099 (Acid345_3099)
Accession : YP_592174.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3683398 - 3684105 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
GTGCAATCGCGCGGAACGAAGAGGTTCGGAGTGCGTCTGCTGGTCGTTGAAGACGATTTAGCCATCCAGGAGTTTCTCAA
GCGTGCTTTGGTGGAAGCCGGTTACCAGGTGGACGTGGCGGCCGACGGCCGCACCGCCGAGAAGCTTGCTACGGAAGGCA
TTCACGATGGGCTCATCATTGATCTGGGTTTGCCCGACATTGACGGTCTCGACTTGATCGCGCGCACCCGGGCGCAAGGA
AATTCCGCGCCGGTGCTGATCCTCTCCGCTCGCCGATCGGTGGATGAACGCGTGCGCGGCCTGGAACAAGGCGGCGACGA
CTACCTCACCAAGCCATTCGCTCTCTCGGAGTTGCTGGCGCGCTTGCGTAACCTATTGCGCCGCGCGAGCCCCGGGCAGC
ATGAATCGACGCGGCTGCGGATTGCGGACCTGGAACTCGATTTAGTGCGGAGAGAGGCGAAGCGCGGTGCAAATGTGCTG
CAACTTACGCCCCAGGAGTTCGCGTTGCTGGAATACTTGTGCCGCAACACCGGCCGGGTGGTAACACGCACAATGATCCT
GGATCACGTTTGGAAGATGCGGATTGATCCGGCAACCAACGTAGTGGACGTGCACATCTACAGGCTGCGAAGCAAGGTGG
ACCGCGACGCACCGAAGGCCCTGATCCACACCATTCGCGGAGTCGGGTATGTTCTCAAAGATTCTTAG

Protein sequence : 
MQSRGTKRFGVRLLVVEDDLAIQEFLKRALVEAGYQVDVAADGRTAEKLATEGIHDGLIIDLGLPDIDGLDLIARTRAQG
NSAPVLILSARRSVDERVRGLEQGGDDYLTKPFALSELLARLRNLLRRASPGQHESTRLRIADLELDLVRREAKRGANVL
QLTPQEFALLEYLCRNTGRVVTRTMILDHVWKMRIDPATNVVDVHIYRLRSKVDRDAPKALIHTIRGVGYVLKDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-25 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_3099 YP_592174.1 two component transcriptional regulator BAC0125 Protein 1e-30 49
Acid345_3099 YP_592174.1 two component transcriptional regulator BAC0083 Protein 9e-32 49
Acid345_3099 YP_592174.1 two component transcriptional regulator BAC0197 Protein 4e-30 49
Acid345_3099 YP_592174.1 two component transcriptional regulator BAC0308 Protein 3e-29 47
Acid345_3099 YP_592174.1 two component transcriptional regulator BAC0347 Protein 1e-27 46
Acid345_3099 YP_592174.1 two component transcriptional regulator BAC0111 Protein 4e-31 46
Acid345_3099 YP_592174.1 two component transcriptional regulator BAC0638 Protein 5e-26 46
Acid345_3099 YP_592174.1 two component transcriptional regulator BAC0487 Protein 1e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_3099 YP_592174.1 two component transcriptional regulator VFG1390 Protein 3e-30 48
Acid345_3099 YP_592174.1 two component transcriptional regulator VFG1386 Protein 2e-27 44
Acid345_3099 YP_592174.1 two component transcriptional regulator VFG0596 Protein 3e-25 43
Acid345_3099 YP_592174.1 two component transcriptional regulator VFG1389 Protein 1e-21 43