Gene Information

Name : Acid345_3097 (Acid345_3097)
Accession : YP_592172.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 3680939 - 3681907 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence :
ATGGCGCTTTACCTGGTGACCGGCGCGGCCGGTTTTATCGGCCGTTCAATTGCGCAGCAACTGCTGGCAGGTGGCGCAGC
GGTGCGCGGGATCGACAATTTTTCGACGGGAAAACGCGGCAACCTCGTAGGACTCGAAGGGATGGAGTTCATCGAGGGAG
ATATCACCGATCCGGCTGCAGTGGGGCGGGCTTGCGACGGAGTGGAGGTCGTGTTTCACGAGGCAGCGCTGGCTTCCGTT
CCACGATCGGTTGCCGATCCGCTTGCCACCAACCACGCCAACGTGACTGGGACATTGCAATTGCTGCAGGCGGCGCATCG
TGCCGGAGTGCGGCGCGTGATCTACGCGGGTTCGTCGTCGGCGTATGGCGATACGCCGACCCTACCGAAGAACGAAGAGA
TGCTGGCGAATCCGATTTCGCCCTATGCGGTGTCGAAACTGACAGGCGAGTACTACCTGCGTTCTATGTACGCGGTACAT
GGAATGGAGACGGTGACGATCCGCTACTTCAATGTCTTTGGACCCTACCAGGATCCGGGCTCGCAGTACTCGGGAGTGCT
GGCGAAATTCATTCCGCAAATGCTGCGCGGCGAAACGCCGACGATTCACGGCGATGGCGAGCAGAGTCGCGACTTCACGT
ACATCGAAAACGTGGTGAAGGCGAACATTGCGCTGGCGAATGCGCCGGCAGAACGGGTGGCAGGCGAAGTGTTCAACGTC
GCTACCGGAACTCGCATCTCGCTGAATGAAACCGTCGCGTTGTTGCGCGAGATGACTGGATATACGGGGGCGGTGCATCA
TGGGCCGGAGCGCAAGGGCGACGTGAAACATTCGCTGGCGGACATCAGCAAGGCGAAGCGGGCGTTTGGATTTGAGCCGA
CCGTGATGTTCCCCGCGGGATTGCATCGCACGGTGGAGTGGTATCGGAAGGCGCTGGCGGAAGATGCGGTGGAGACGGCA
CGAAAGTAG

Protein sequence :
MALYLVTGAAGFIGRSIAQQLLAGGAAVRGIDNFSTGKRGNLVGLEGMEFIEGDITDPAAVGRACDGVEVVFHEAALASV
PRSVADPLATNHANVTGTLQLLQAAHRAGVRRVIYAGSSSAYGDTPTLPKNEEMLANPISPYAVSKLTGEYYLRSMYAVH
GMETVTIRYFNVFGPYQDPGSQYSGVLAKFIPQMLRGETPTIHGDGEQSRDFTYIENVVKANIALANAPAERVAGEVFNV
ATGTRISLNETVALLREMTGYTGAVHHGPERKGDVKHSLADISKAKRAFGFEPTVMFPAGLHRTVEWYRKALAEDAVETA
RK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 8e-51 44
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 8e-51 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_3097 YP_592172.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 3e-51 44