Gene Information

Name : Acid345_2307 (Acid345_2307)
Accession : YP_591382.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2731912 - 2733381 bp
Length : 1470 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGCAGGGAGAATCCAGAGTTATGAGCAGCTCCAAAGGCAACGGAAACGGCACCCCCACTGTCCCTCAGGCCCGCGCAGA
ATGGGTCAAGAAGCGCAAAGAAGAAGCTGCCCGCACCGGAGACGACAACGTCTCCCAGATGCATTTTGCGCGCAAGGGCC
TCGTCACCGAGGAAATGCTCTTTGTCGCTGAACGCGAGCGCGTGAGCCCCGAAATCATCCGCGCCGAAGTTGCCGCCGGA
CGCATGATCATTCCGGCCAACATTAATCACCCAGAGCTTGAGCCGATGGCCATCGGCATTGAGTCGCGTTGCAAGATCAA
CGCCAATATCGGCAACTCCGCCGTTACGTCCGACGTCGAAACCGAGCTCAAGAAGCTCCACACCTCTGTGCATCATGGCG
CAGACACGGTGATGGACCTCTCTACCGGCGGCGACATCCACGACATCCGCGAAGCCATCATCCGTCATTCGCCTGTGCCC
ATCGGTACCGTGCCGATTTACGAAGCGGTCTCGCGGGTGAAGCGGATTGAAGATCTGACCGCCGATCTCATGCTCGAAGT
GATCGAGGAGCAAGCACAGCAGGGCGTGGATTACATGACCATCCACGCCGGCGTGCTCATTCAGTACTTGCCGCTGGTCG
CCAAGCGAATCACCGGCATCGTCAGCCGCGGCGGCGCGATCCTGGCGCAATGGATGGCCCACCATCACAAGCAGAACTTC
CTCTATGAACGCTTCGACGACATCACCAAGATTCTGAAGAAGTATGACGTCTCGTATTCGTTGGGCGACGGCCTGCGTCC
GGGCTGCATTGCCGACGCTAGCGACGAAGCGCAGTTCGCCGAGCTTAAAACTCTAGGCGAACTAACGACCAAAGCCTGGG
AGTACGACGTACAGACGATGATTGAAGGTCCGGGCCACGTGCCGCTCGACAAGATCAAAGAGCAGGTGGAGAAAGAAGTG
GAGTGGTGCCACGGCGCGCCGTTCTACACTCTCGGCCCGCTTGTCATCGATATTGCTCCGGGCTACGACCACATCACCAG
CGCGATCGGCGCGGCGATCATCGGCTGGCACGGCGCATCTATGCTCTGCTACGTGACGCCGAAAGAACACCTCGGTCTGC
CGAATGAAAAAGATGTGAAGGACGGCATCATCGCTTACAAGATCGCCGCCCACGCTGCCGACGTCGCCCGTCATCGTCCG
GGCGCTCAGGACCGCGATAACGCCCTCAGCCACGCCCGCTACACCTTCGACTGGGAGTCGCAGTTCAATCTTTCACTCGA
TCCCGAGACCGCCCGCTCGATGCACGACGAGACGCTTCCGGATGCGTATTACAAAGAAGCGGCGTTCTGCTCGATGTGCG
GCCCGAAATTCTGCTCGATGAATTATTCGTCGAAGGTCGATGAATACAACAAGAAGGTCCACGGCATCGATAAGGCCGAG
TTCATTTCGCAGCTAACAGTTTTGAAATAA

Protein sequence :
MQGESRVMSSSKGNGNGTPTVPQARAEWVKKRKEEAARTGDDNVSQMHFARKGLVTEEMLFVAERERVSPEIIRAEVAAG
RMIIPANINHPELEPMAIGIESRCKINANIGNSAVTSDVETELKKLHTSVHHGADTVMDLSTGGDIHDIREAIIRHSPVP
IGTVPIYEAVSRVKRIEDLTADLMLEVIEEQAQQGVDYMTIHAGVLIQYLPLVAKRITGIVSRGGAILAQWMAHHHKQNF
LYERFDDITKILKKYDVSYSLGDGLRPGCIADASDEAQFAELKTLGELTTKAWEYDVQTMIEGPGHVPLDKIKEQVEKEV
EWCHGAPFYTLGPLVIDIAPGYDHITSAIGAAIIGWHGASMLCYVTPKEHLGLPNEKDVKDGIIAYKIAAHAADVARHRP
GAQDRDNALSHARYTFDWESQFNLSLDPETARSMHDETLPDAYYKEAAFCSMCGPKFCSMNYSSKVDEYNKKVHGIDKAE
FISQLTVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-132 63
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-132 63
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 2e-128 61