Gene Information

Name : Acid345_1982 (Acid345_1982)
Accession : YP_591057.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2375798 - 2376967 bp
Length : 1170 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGTTCGCTAGCCGTCTCGTAAGTTTCGATCCCGCTCCGGGCGATCGCTATCGCCCCATCGCCACGCCGATATATCA
GACGGCAACCTTTGAGCAGGAACACGCCGATGAATTCGGCGAATACGACTATTCGCGCAGCGGCAATCCCACGCGCACGG
TGCTGGAAAAGCATCTGGCATCGCTGGAAAACGGGACCCGCGGCTTTTGCTTCTCGAGCGGCATGGCGGCGATAACCACC
ACGACCAAGCTTCTGCGCTCCGGCGACGACATTCTTGCCGACAGCGATCTCTACGGCGGAACCTGTCGTTTGTTTACCAA
AGTCCTCGAGAAGACGGGTATTTCCGCGCGCTATGCCGACGCCGCGAATCTCGAGCAATTCGCGCAGCAGATCAGGCCGG
AGACGAAGCTGGTCTATGTCGAGACGCCGACGAATCCGCTGCTCCGCGTGCTCGACTTACGCAAGCTCGCCGAGATAGCT
CACGCGAATGGCGCGATTCTGTGCGTGGACAACAGCACGATGTCGCCGTACCTGCAGAATCCCCTCGATCTTGGCGCGGA
CATAGTGCTGCATTCGGCGACGAAATATCTCGGCGGCCATCATGATGTGACGGCTGGCGCGATCGTGGTGAAAGACGAGG
AACTGGCGAAGCAGGTCTATTTCATCCAGAACGCGGAGGGCAATGGACTCTCGCCGTTCGATTGCTTCCTGCTGCTGCGC
GGCATTAAGACCCTAAAGCTGCGCGTGGATTGCCAGCAGCGCAATGCGCTTACGATCGCGAAATTTCTGGCGTCGCATCC
AGACGTGAAGAAGGTCTATTATCCGGGACTTGCCGATCATCCGGGATACGAATTGCAGCGGTCGCAGGCGCGCGGATCCG
GAGGCGTATTGAGTTTTACGACTGGCTCGGTGGAAGTTTCGAAAACGGTCGCGGAACTGACGAAGCTTTTCCGGATTACC
GTGAGCTTCGGCAGTGTGAATTCGTCCATCAGCTTGCCGGGGAACATGTCGCATGCGAGCGTTCCGCCGCAGGTCTTGGC
GCAACGTGATCTTCCGGCAGACTTGGTGCGTATCTCGGTCGGGATTGAAGACGAAGAGGACCTGATTGCCGATCTCGATC
AAGCGTTGCAAGTCGCGACGGGGAAGACATTGGCGGCAAGTACGCGGTGA

Protein sequence : 
MKFASRLVSFDPAPGDRYRPIATPIYQTATFEQEHADEFGEYDYSRSGNPTRTVLEKHLASLENGTRGFCFSSGMAAITT
TTKLLRSGDDILADSDLYGGTCRLFTKVLEKTGISARYADAANLEQFAQQIRPETKLVYVETPTNPLLRVLDLRKLAEIA
HANGAILCVDNSTMSPYLQNPLDLGADIVLHSATKYLGGHHDVTAGAIVVKDEELAKQVYFIQNAEGNGLSPFDCFLLLR
GIKTLKLRVDCQQRNALTIAKFLASHPDVKKVYYPGLADHPGYELQRSQARGSGGVLSFTTGSVEVSKTVAELTKLFRIT
VSFGSVNSSISLPGNMSHASVPPQVLAQRDLPADLVRISVGIEDEEDLIADLDQALQVATGKTLAASTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-77 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-78 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_1982 YP_591057.1 cystathionine beta-lyase BAC0207 Protein 2e-54 41