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Name : Acid345_1856 (Acid345_1856) Accession : YP_590931.1 Strain : Candidatus Koribacter versatilis Ellin345 Genome accession: NC_008009 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 2232682 - 2233680 bp Length : 999 bp Strand : + Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : ATGGCAGAAAACAACGGACACTACGCACTGCGCCTGAAGACCGGCCTAGCCGAAATGCTCAAGGGCGGCGTAATCATGGA TGTAATGAACGCCGCGCAGGCCGAAATCGCGCAGGAATCCGGCGCCACGGCCGTCATGGCTCTGGAGAAGGTACCCGCCA TGCTTCGCGCCGAAGGCGGCGTCGCCCGCATGGCCAGTCCCAAGGTGATCAAAGAGATCATGCGCACCGTGGACATCCCG GTCATGGCCAAGTGCCGCATCGGCCACTTCGCCGAGGCGCAGATACTCCAGGAACTCGGCGTCGATTACATCGACGAGTC CGAAGTCCTCACCCCCGCCGACGAAGAACACCATGTCGACAAGCACGCCTTCAAGACGCCGTTTGTCTGCGGCGCCCGCA ACCTCGGTGAAGCTCTCCGCCGCATCGCCGAAGGCGCAGCCATGATCCGCACCAAGGGCGAAGCTGGCACCGGCGACGTC ATCCATGCCGTCAAGCACATGCGTCAAATCTTGAAAGAAATGAAGCAGTTGACGGTGATGCCTGAAGAAGAACTTTATGC GGCAGCCAAGAACCACCAAGCACCCTACGAGCTCATTCGCACGGTCGCCAAAGCTGGCAAGCTCCCCGTGCCGAACTTCT CCGCTGGCGGCATCGCCACTCCGGCAGACGCCGCTCTCATGATGCAGCTGGGCGCCGAGGCCGTCTTCGTAGGCTCCGGC ATCTTCATGAAGGAGCGAGCTACCCCGCTCGAGGTAGGAAAGTGGAGTGAACAGGACGCCAAGCAAGGTCGCTGCTCGAG CAATCAGGTAGGTACCCCACGAAATCCTGAAGAGCGCGAAGAAGCCATGACTCGCGCCAAGGCGATCGTCGAGGCCACTG CACACTTCAACGACCCCAAGGTCTTGGCCGAAGTTAGCGAGAAGGTCACGGGAACGATGAAGGGCCTCGCCGTCTCGGCT ATCGAAGAGAAGGAACTGCTACAGACCCGTGGCTGGTAA Protein sequence : MAENNGHYALRLKTGLAEMLKGGVIMDVMNAAQAEIAQESGATAVMALEKVPAMLRAEGGVARMASPKVIKEIMRTVDIP VMAKCRIGHFAEAQILQELGVDYIDESEVLTPADEEHHVDKHAFKTPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGDV IHAVKHMRQILKEMKQLTVMPEEELYAAAKNHQAPYELIRTVAKAGKLPVPNFSAGGIATPADAALMMQLGAEAVFVGSG IFMKERATPLEVGKWSEQDAKQGRCSSNQVGTPRNPEEREEAMTRAKAIVEATAHFNDPKVLAEVSEKVTGTMKGLAVSA IEEKELLQTRGW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 3e-79 | 57 |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 2e-79 | 57 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 2e-79 | 57 |
