Gene Information

Name : Acid345_1620 (Acid345_1620)
Accession : YP_590696.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1964226 - 1964951 bp
Length : 726 bp
Strand : -
Note : -

DNA sequence :
ATGGTACGGGTTGACGGCAACGGCAGTGATAGCCTGATTAAGGTCCGGGATCTCGACAAAACCTACAAGCGTGGCGGCGA
AGACGTCCACGTGCTCCAGGGCCTGAAGCTCGACATCAGCAAAGGCGAGTTCGTCGCCTTCATGGGCCCCAGCGGTTCCG
GCAAAACCACGCTCCTCAACTTGCTTGGCGGACTTGACCTACCGACTCGTGGCACGATTAATGTCGCTGGCGACGAAGTC
TCGCGCATGTCTGGCTCGAAGCTTACCCACTGGCGCGCCCGCCACGTCGGGTTCGTCTTCCAGATGTACAACCTCATCCC
TGTACTTACAGCATTCCAAAACGTTGAACTGCCGCTGCTGTTAACTAAGCTATCGTCATCACAGCGCAAGAAGCACGTTG
AGACCGCCATGGCGCTCGTTGGTCTTGAGCACCGCATGCATCACTATCCAAGGCAACTCTCCGGCGGACAGGAGCAGCGT
GTCGGCATTGCTCGTGCCATCGTCGCCGACCCAACGTTCCTGCTCTGCGACGAGCCTACCGGCGACCTCGACCGCAAATC
GGCTGACGAAATCCTCACGCTGCTGGAACAGCTCAACCGTGAACACGGAAAAACGATCCTGATGGTTACGCACGACCCAC
TAGCGGCCGAGCGTGCCCATTCCCTCCTTCACATGGATAAAGGCGTTCTCGTTGAAGCCGAGAAGGCCCGCGTAGGAGAA
GTGTAA

Protein sequence :
MVRVDGNGSDSLIKVRDLDKTYKRGGEDVHVLQGLKLDISKGEFVAFMGPSGSGKTTLLNLLGGLDLPTRGTINVAGDEV
SRMSGSKLTHWRARHVGFVFQMYNLIPVLTAFQNVELPLLLTKLSSSQRKKHVETAMALVGLEHRMHHYPRQLSGGQEQR
VGIARAIVADPTFLLCDEPTGDLDRKSADEILTLLEQLNREHGKTILMVTHDPLAAERAHSLLHMDKGVLVEAEKARVGE
V

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_1620 YP_590696.1 ABC transporter ATPase NC_012469.1.7686878. Protein 3e-40 47
Acid345_1620 YP_590696.1 ABC transporter ATPase NC_008702.1.4606598. Protein 4e-37 47
Acid345_1620 YP_590696.1 ABC transporter ATPase CP001581.1.gene798.p Protein 4e-37 43
Acid345_1620 YP_590696.1 ABC transporter ATPase NC_012469.1.7685735. Protein 8e-30 41