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Name : rph (Acid345_1616) Accession : YP_590692.1 Strain : Candidatus Koribacter versatilis Ellin345 Genome accession: NC_008009 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 1960181 - 1960918 bp Length : 738 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCATTTCCGCTCGGATAACCGCACTCCTGACCAACTGCGTCCAGTGAGCATCATTCCCGATTACATCTCGACCGCCGA AGGTTCGTGCCTGATCGAGGTCGGGAACACGCGCGTAATCTGCACGGCGTCGATCGAGGAATCGGTTCCGTCGTTCCTGC GCAACAGCGGCAAGGGCTGGCTGACCAGCGAGTACGCGATGCTTCCGCGCGCTACGCTCACGCGCACACCGCGCGAGGTT TCGAAGGGCCGTGCTTCGGGGCGGACCCACGAGATCCAGCGGCTGATCGGGCGTTCTCTGCGCGCGGTGACGGACCTGAC CAAGCTTGGGGAGCGCACGCTTTTCGTAGATTGCGACGTGATCCAGGCCGATGGCGGAACGAGGACTGCGTCCATCACGG GAGCGTTCGTTGCGGTCGGGCTCGCGGTGCAGAAGCTCACCGAAGCGGGGACGCTCAGCATTTCTCCTCTGCGCGATTAC GTCGCGGCGACGAGTGTTGGAATCGTGGATGGAGCGGTGTTGCTCGATCTTGCGTATGAAGAGGATTCGCGCGCCGAAGT GGACATGAACATCGTGATGACCGGAAGCCGAAAAATGGTCGAGATCCAGGGAACAGCGGAGCAGCATCCGTTCGATGACG AGCAGTTGGCCAAGATGATGTCGCTGGCGAAGGCGGGGATTGAGCAGCTCATCGTGAAGCAGAAAGCAGCGCTGGGAACG ACGGTTTTGAGCCAATAA Protein sequence : MHFRSDNRTPDQLRPVSIIPDYISTAEGSCLIEVGNTRVICTASIEESVPSFLRNSGKGWLTSEYAMLPRATLTRTPREV SKGRASGRTHEIQRLIGRSLRAVTDLTKLGERTLFVDCDVIQADGGTRTASITGAFVAVGLAVQKLTEAGTLSISPLRDY VAATSVGIVDGAVLLDLAYEEDSRAEVDMNIVMTGSRKMVEIQGTAEQHPFDDEQLAKMMSLAKAGIEQLIVKQKAALGT TVLSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-61 | 59 |
