Gene Information

Name : Acid345_1535 (Acid345_1535)
Accession : YP_590611.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1873660 - 1875141 bp
Length : 1482 bp
Strand : -
Note : -

DNA sequence : 
ATGGATACGGCTACGAAAACCAGCACCAAAACCTACCAGATGTACATCGATGGCAAGTTCGTCGAAAGCGCCACGGGAAA
GTTGTTCCCCGTTTACGATCCTTCGACGGAAGAAGTGATTGCTGAGTGTCCGGCAGGAAACGCTGCCGATGTTGACCGTG
CCGTTGCCGCCGCCCGAACGGCTTTTGACGATGGCCCCTGGAACGCAACCACCGCGCAGGAGCGCGGACGCGTCCTCTTC
CGCATTGCTGAAAAGATCCGCCAGCACACGGCTGAACTCGCCGAGATCGAGTGTCGCAATTCCGGCAAGCCCATCGTCGA
AGCCGAGTACGACATTGCCGATTGCGCTACCTGTTTCGAGTACTACGGCGGGCTCGCGACGAAGATCACCGGCCAGGTGA
ATCCGGTTCCTGACAACGCAGTTAGCCTTTCGCTAAAGGAACCGATCGGGGTCGCAGGGCAGATCATTCCGTGGAACTAT
CCGCTGGCGATGGCCGCGTGGAAGCTTGCTCCCGCCATTGCTGCGGGCTGCACCGTTGTCATCAAGCCTGCCGAACAGAC
GCCCCTCACGTTGCTGGAACTTGCGAAGCACTTCGAAGAAGTGGGGCTGCCGAATGGCGTAGTAAATGTTGTGACCGGAT
ACGGTGAAGAAGCGGGTGCGCCCATCGTCGCGCATAAAGATGTGGACAAGATTGCCTTCACCGGCAGTGGAAGCGTGGGC
AAGCTGATTATGCGCGAGGCGAGCGCCACACTGAAGCGCGTCTCGCTCGAACTCGGCGGTAAATCGCCGAATATTTTCTT
CGCCGATGCCGACTTTGAAGCTGCGATTGATGGCGCACTCTTCGGCGTCTTCATCAACCAGGGCGAAGTCTGCTCCGCGG
GCAGCCGAATTCTTGTCGAGCGCCCGATCTATAAGAAGTTCGTGGAGGCGATGACCGAAAAGGCCAAGAAGATAAAACTC
GGCGCGCCGCTCGATCGCGATACGAAGATGGGTCCGTTGGTCAGCAAAGACCAATATGAGCGCGTTCGCGAGTATCAGGA
GATCGGCAAGAAAGAAGCGAAGGTCGCATCCGGCGGCAATCGCCCCAGCGGCTTCGCTAAGGGCTATTACGTCGAACCGA
CGATCTTCTATGACGTGGACAATAGCGCTCGCATTGCGCGCGAAGAAATCTTTGGACCGGTGGCGTCCGTCATCCCATTC
GACAACGAAGCTGATGGCCTGAAGATCGCCAACGACACGCCCTTCGGCCTCGCCGCTGCGGTTTGGACGCGCGACATCTT
CAAGGCATTCCGCATGGTGAAGAAGATCCGCGCCGGCATCGTGTGGGTGAACCACATGCAACCCACGTATTACGAGGCGC
CGTGGGGCGGATACAAGCAATCCGGCTTTGGACGCGAGCTCGGCCCGTGGGGAGTAGAGGAATACCTCGAGACCAAGCAG
GTGCACATCAACCTCAGCGAACAGCCGATTGGGTGGTACTGA

Protein sequence : 
MDTATKTSTKTYQMYIDGKFVESATGKLFPVYDPSTEEVIAECPAGNAADVDRAVAAARTAFDDGPWNATTAQERGRVLF
RIAEKIRQHTAELAEIECRNSGKPIVEAEYDIADCATCFEYYGGLATKITGQVNPVPDNAVSLSLKEPIGVAGQIIPWNY
PLAMAAWKLAPAIAAGCTVVIKPAEQTPLTLLELAKHFEEVGLPNGVVNVVTGYGEEAGAPIVAHKDVDKIAFTGSGSVG
KLIMREASATLKRVSLELGGKSPNIFFADADFEAAIDGALFGVFINQGEVCSAGSRILVERPIYKKFVEAMTEKAKKIKL
GAPLDRDTKMGPLVSKDQYERVREYQEIGKKEAKVASGGNRPSGFAKGYYVEPTIFYDVDNSARIAREEIFGPVASVIPF
DNEADGLKIANDTPFGLAAAVWTRDIFKAFRMVKKIRAGIVWVNHMQPTYYEAPWGGYKQSGFGRELGPWGVEEYLETKQ
VHINLSEQPIGWY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-75 45
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-81 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-83 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-83 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-83 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-72 41
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 2e-54 41
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 8e-54 41
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 8e-54 41
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 8e-54 41
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 6e-54 41
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 2e-54 41
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 3e-53 41
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 3e-53 41
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 6e-54 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-82 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_1535 YP_590611.1 aldehyde dehydrogenase VFG0082 Protein 3e-81 44