Gene Information

Name : Acid345_1381 (Acid345_1381)
Accession : YP_590457.1
Strain : Candidatus Koribacter versatilis Ellin345
Genome accession: NC_008009
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1672429 - 1673919 bp
Length : 1491 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGTCGTGTCGGCCGTAGAACTGAACAGCAACGTCAGCCAATTCATCACAAAGCCGCGAAAGATGCTGATCGGCGG
GAACTGGATCGATAGTGCGTCGGGTAAATTCTTTGAGACCCTGAATCCGGCGACTGGCGAAGTACTGGCGCGAGTTGCCG
AAGGCGATCGTGCCGACATTGATCTCGCCGTCGCCGCGGCGCGGAAGGCATTTGAGAGCGGACCGTGGTCGAAAATGTCG
CCGTCGCAACGGGGACGTCTTTTGTGGAAACTCGCGGACCTGCTCGAGCAGCACCTGGAAGAGTTCGCCGAGTTGGAATC
GCTCGACAATGGGAAGCCGCTGTCGGTGGCGCGGGTGGCCGACGTTCCGCTCGCGGTAGACCTTTTCCGTTACATGGCTG
GCTGGGCGACGAAGGTGGAAGGCAACACGATTCCGCTGGGCCCGCAGTTCCATGCTTATACCTATCGCGAACCGGTGGGC
GTAATCGGCCAGATCATTCCCTGGAACTTTCCGCTGCTGATGGCCGCGTGGAAACTGGGTCCGGCGCTGGCGGTTGGGTG
CACGGTGGTGTTGAAGCCGGCGGAACAGACACCTCTCTCCGCGCTGCGCCTGGGCGAACTGATCATGGAAGCAGGCTTCC
CCGATGGCGTGGTGAACGTTGTGCCGGGCTTCGGCGAAACTGCCGGCGCTGCGCTGGCCGCCCATCCGGACGTCGACAAG
ATTGCGTTCACCGGATCGACAGAAGTCGGCAAATTGATTGTGCAGGCTGCCGCAGGCAACCTGAAAAAAGTCTCTCTCGA
ACTGGGCGGCAAGTCGCCGAATATCGTGCTCGCTGATGCGGACCTGGACATTGCGATATCAGGCAGCGCGAACGCGATCT
TTTTCAATCACGGCCAGTGCTGCTGCGCGGGCTCACGGCTGTTCGTACACAAGAGCCAGTTCGACAAAGTGGTGGAGGGT
GTGGCCGAAGCCGCAAAGAACATTCGCTTGGGATCTGGGCTTGATCCGGCAACCAACATGGGTCCGCTGGTTTCGCAGGA
GCAACTCGATCGCGTGTGCGGGTATCTCGAATCTGGGGTGCAACAAGGAGCAAAACCCCTGGTTGGCGGGAAGAAACAGA
CGGGGCCGGGCTACTTCGTGGAGCCAACGGTGCTGGTGGATGTGAAGCCGACGATGAAAGTCGTTTGCGAAGAGATCTTC
GGACCCGTGGTCACGGCGATCCCGTTCAACAGCGTGGACGAGGTGTTGAACTCAGCCAATGCGTCGAGCTACGGTCTCGC
GGCAGCGGTGTGGACGCGCGACATTAACAAGGCGCATTCACTGGCGGCAAAGCTGCGCGCCGGCACAGTGTGGGTGAATT
GTTACAACGTGTTCGACGCCGCGCTGCCGTTTGGGGGTTATAAGCAATCGGGCTGGGGACGCGAGATGGGGCACGACGCA
CTCGAGCTCTACACCGAGACCAAAGCGGTCTGTGTGCGCCTGGAAAACTAA

Protein sequence :
MSVVSAVELNSNVSQFITKPRKMLIGGNWIDSASGKFFETLNPATGEVLARVAEGDRADIDLAVAAARKAFESGPWSKMS
PSQRGRLLWKLADLLEQHLEEFAELESLDNGKPLSVARVADVPLAVDLFRYMAGWATKVEGNTIPLGPQFHAYTYREPVG
VIGQIIPWNFPLLMAAWKLGPALAVGCTVVLKPAEQTPLSALRLGELIMEAGFPDGVVNVVPGFGETAGAALAAHPDVDK
IAFTGSTEVGKLIVQAAAGNLKKVSLELGGKSPNIVLADADLDIAISGSANAIFFNHGQCCCAGSRLFVHKSQFDKVVEG
VAEAAKNIRLGSGLDPATNMGPLVSQEQLDRVCGYLESGVQQGAKPLVGGKKQTGPGYFVEPTVLVDVKPTMKVVCEEIF
GPVVTAIPFNSVDEVLNSANASSYGLAAAVWTRDINKAHSLAAKLRAGTVWVNCYNVFDAALPFGGYKQSGWGREMGHDA
LELYTETKAVCVRLEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-91 51
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-90 47
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-93 47
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-93 47
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-93 47
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-92 47
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 5e-86 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-86 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acid345_1381 YP_590457.1 aldehyde dehydrogenase VFG0082 Protein 2e-90 47