Gene Information

Name : hemC (BCI_0061)
Accession : YP_588539.1
Strain : Baumannia cicadellinicola Hc
Genome accession: NC_007984
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 72230 - 73165 bp
Length : 936 bp
Strand : +
Note : identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212

DNA sequence :
ATGCTTAATAACATATTGAAAATTGCAACCCGTCAAAGCCCGCTTGCAATTTGGCAAGCTAACTATGTGCGTAATCAACT
GTTATCCTTTTATCCAACTTTGTTAATAGAATTAGTACCAATAGTTACTAGCGGTGATCTGATTCTAGATAAGCCGCTAA
TGAAAGCCGGAGGAAAAAGACTATTTATTAAGGAACTAGAACAAGCAATGCTAGAACGTCGCGCTGATATAGCAGTTCAT
TCCATGAAGGATATAACAATATCTTTTCCAGAAGGTATAGGATTAGCTGTACTATGTGCACGAGAAGACCCACGTGACGC
TTTTATTAGCACACATTATGCTAGTATAGATCTGCTACCAACTGGTGCAGTTGTCGGGACTTCTAGCATGCGTCGACAAT
GCCAACTACGTGAACGTCGTCCTGATTTGGTTATGCGTGATCTACGCGGTAATATTGGTACTAGGCTAGAAAAATTAGAT
AAAGGTGAATATGATGCATTAATTTTAGCAGCAGCTGGACTTAAACGTCTAGATTTAGCACATCGTATTCGTATGATAAT
CGATCCGACTGAATTATTACCTGCAGTTGGTCAGGGCGTAATTGGTATTGAATATCGACTAGAGGATACACATATACTCT
CTATTTTAGCCCCGTTACATCATAGTGCTACTGCTTTAAGAGTAAGTGCTGAACGTGCTATGAATGCTAAGCTTGCAGGT
GGATGTCAAGTACCTATTGGTAGTTATGCTGAAATTGAGGGAGACCAAATATGGTTACGTGCTCTAGTTGGTTCACCAGA
TGGTTCTCTTATTATACGTAGCGAAGGAAGAGCACCTCTATCTCAAGCCGAAATACTTGGCCAAAGTATAGCTAATGATC
TTCTATACCGAGGAGCAGAGAGCATTCTTTGTCGTGCTTTTCAAGTTGATTCATGA

Protein sequence :
MLNNILKIATRQSPLAIWQANYVRNQLLSFYPTLLIELVPIVTSGDLILDKPLMKAGGKRLFIKELEQAMLERRADIAVH
SMKDITISFPEGIGLAVLCAREDPRDAFISTHYASIDLLPTGAVVGTSSMRRQCQLRERRPDLVMRDLRGNIGTRLEKLD
KGEYDALILAAAGLKRLDLAHRIRMIIDPTELLPAVGQGVIGIEYRLEDTHILSILAPLHHSATALRVSAERAMNAKLAG
GCQVPIGSYAEIEGDQIWLRALVGSPDGSLIIRSEGRAPLSQAEILGQSIANDLLYRGAESILCRAFQVDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-74 55
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-74 55