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Name : dnaB (BCI_0550) Accession : YP_588980.1 Strain : Baumannia cicadellinicola Hc Genome accession: NC_007984 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 577980 - 579392 bp Length : 1413 bp Strand : + Note : identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665 DNA sequence : ATGTTAGAAAAAAAAAACAAGAATAAAGAAAATTGCTACCCAGATTATCATGTAGATATTTTAAAAATACCACCTTCTTC ATTAGAAGCAGAACAGTCAGTGCTAGGCGGCTTAATGCTGGATAATAAAAGGTGGGATAATATTTCCGAACGTGTAGCAA CTGATGATTTTTTCAATCGCCCTCATCAGTTGATTTTTCGCGAAATGCAACTGTTATTCGATATGAGTAAACCAATCGAT CTCATTACTCTTGCCGAATCTTTAGAACAAAAAGGTAAGTTAGACGCCGTGGGTGGTTTTTCTTACTTAGCTGAGTTATC AAAAAATACCCCTAGTGTTGCTAATATATCTGCTTACGCAGATATTATTCGTGAGCGGGCTATTGTTCGTGAACTAATCA CTGTTGCTCATGAGATTGCAAATGCTGGATATAATCCACAGGGAAGAAGTAGTGAAGAGTTGCTCGATTTTGCCGAATCT CAGGTATTCAAAATTGCTGATAATCGAGCGAACAAAGATGAAGGTCCTAAAAGTATTGACCTTATTCTTGAAAAAACCGT TACACGCATTGAGCAACTATATCAGAATCCACATGATGGTGTAACTGGTGTATCAAGTGGTTACCAAGACTTAGATAGAA AAACGGCTGGATTACAGAAATCTGATTTAATTATAGTTGCCGCACGACCCTCCATGGGTAAAACAACTTTAGCTATGAAT ATGTGCGAACACGCGGCTATGACAGAAGAAAAACCAGTTCTTATCTTTAGCCTAGAGATGTCTGGTGAACAGATAATGAT ACGTATGTTAGCTTCACTATCACGTGTAGACCAAACTCGTATCCGTACTGGTAGATTAGATGATTCAGATTGGGCACGTC TATCTAGTACTATGGGTATTTTGCTAAAAAAACAGAATATGTTATACATTGATGACTCATCAGGTTTAACACCCACAGAT GTACGTTTTCGAGCAAGACGAGTATTTCGTGAACACGATGGACTGAGTCTAATTATGATTGATTATTTACAATTAATGCG TGTTCCAGCATTAGCTGATAACCGTACTATGGAGATTACAGAAATATCCCGCTCACTAAAAGCATTAGCTAAAGAGTTAC AGGTACCGGTGATTGCTCTTTCTCAGTTAAATAGAAGCTTAGAGCAGCGTGCTGATAAGCGTCCTGTTAACTCAGATCTA CGTGAATCTGGTTCAATCGAACAAGATGCAGACTTAATAATATTTATTTACCGTGATGAAGTTTATAATAATAATAGTGA TATGAAAGGTATTGCTGAAATTATACTAGGTAAACAACGCAACGGTCCTATCGGTACTATACGGTTAACTTTTAACCAGC AGTGGTCCAGATTTGATAATTATGCTGATCTACAAGATCAAGATAGTGATTAG Protein sequence : MLEKKNKNKENCYPDYHVDILKIPPSSLEAEQSVLGGLMLDNKRWDNISERVATDDFFNRPHQLIFREMQLLFDMSKPID LITLAESLEQKGKLDAVGGFSYLAELSKNTPSVANISAYADIIRERAIVRELITVAHEIANAGYNPQGRSSEELLDFAES QVFKIADNRANKDEGPKSIDLILEKTVTRIEQLYQNPHDGVTGVSSGYQDLDRKTAGLQKSDLIIVAARPSMGKTTLAMN MCEHAAMTEEKPVLIFSLEMSGEQIMIRMLASLSRVDQTRIRTGRLDDSDWARLSSTMGILLKKQNMLYIDDSSGLTPTD VRFRARRVFREHDGLSLIMIDYLQLMRVPALADNRTMEITEISRSLKALAKELQVPVIALSQLNRSLEQRADKRPVNSDL RESGSIEQDADLIIFIYRDEVYNNNSDMKGIAEIILGKQRNGPIGTIRLTFNQQWSRFDNYADLQDQDSD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 7e-104 | 53 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-104 | 53 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-103 | 52 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-97 | 51 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-89 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-89 | 49 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 9e-95 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 5e-84 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-75 | 43 |
