|
Name : thiC (BCI_0041) Accession : YP_588519.1 Strain : Baumannia cicadellinicola Hc Genome accession: NC_007984 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 51358 - 53226 bp Length : 1869 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCAAGATCATCAATACCTGCTTCACGCCGAGTGAGCCGTGCAAAAGCACAGGCTTTTATGGATAGCTTAACAGGTAG TAGCTATTTTCCTAACTCAAGAAGGATATATTTACAAGGTAAAACACCTTCAGTACATGTACCAATGCGTGAAATTAAGC TACATCCTACATTGATCGGTAAAAACGGTGAACATTATGAGGATAATCAACCTATACCAGTTTATGATACTTCAGGTCCT TACGGTGATCCTACTATAGCAATTAACGTACGTACAGGTCTTAACCGGTTACGCGAGATATGGATTCTTGCACGACAAGA TAGTGAGCCAATAAGTAATAATAATAACGATCGTCAGAGTTCAGATAAACAGTTAAGTTTTACTACTAACTATAATCCAC GCCGAGCTAGCTATGGACGCTGTATTACACAATTACATTACGCACGTGCCGGTATCATAACGCCAGAAATGGAGTTTATA GCTTTACGTGAAAATATGGGCCGAGAACGTATTAGTAGCAACGTGCTACATCAGCAGCATTTAGGTTCTAACTTTGGTGC TAAAAAAGCTGATCATATTACAGCAGAATTTGTCCGGCAGGAAGTAGCAGCAGGACGTGCTATTATACCTAGTAATATTA ATCATCCAGAATCTGAGCCAATGATCATTGGCCGTAATTTTCTCGTAAAAGTAAATGCAAATATTGGTAACTCAGCAGTA ACATCTTCTATTGAGGAAGAAGTCGAAAAGTTAGTATGGGCTACTCGTTGGGGAGCTGATACAGTCATGGACTTATCTAC TGGTAGTTATATTCACGAAACTAGAGAATGGATATTACGTAATAGCCCAGTACCTATAGGTACTGTACCTATCTATCAAG CGTTAGAAAAAGTAAATGGAGTCATAGAAAATCTTAATTGGGATATTTTCTACGAGACATTATTAGAACAAGCTAACCAA GGAGTAGATTATTTTACGATTCATGCTGGCGTATTAAAACGTTATGTTCTACTAACAGCTAGTAGGTTAACTGGTATCGT ATCGCGTGGTGGCTCTATTATGGCTCAATGGAGTTTAGTACATAATCAGGAAAACTTCCTTTATGAGCATTTTAGTGAAA TTTGCAAGCTTTGTGCTGCTTATGATATTGCTCTATCTCTTGGAGATGGTCTAAGACCCGGTTCCGTACAAGATGCTAAT GATGAAGCACAATTTTCTGAGTTACATACACTAGGCGAATTAACTAAAATTGCCTGGGAATATGATGTGCAAGTAATGAT CGAAGGACCTGGTCATATTCCACTACATATGATTGAGCGTAATATGACTGATCAACTTAAATATTGCCACGAAGCACCAT TCTACACTCTCGGACCACTCACAACAGATATTGCTCCTGGTTATGACCACTTTACTTCAGGTATTGGTGCCGCACTAATA GGCTGGTTTGGATGTGCTATGCTGTGCTATGTAACTCCTAAAGAGCATCTAGGTTTACCTAATAAGGAAGACGTAAAACA GGGTTTAATTGCCTATAAAATTGCCGCACATGCTGCAGATCTAGCTAAAGGACATCCTGGTGCTCAAATACGTGATAATG CTATGTCAAAAGCTCGTTTCGAATTTCGCTGGGAAGATCAATTTAACTTAGCTTTAGATCCTTTTACGGCGCGTATGTAT CACGATGAAACTATACCGCAAACAGCAGGAAAATTAGCAAATTTTTGCTCGATGTGTGGTCCTAAGTTTTGTTCTATGAA GCTATCAAAAAAAATACGTAATTACACTAATATGAAAAATATAAAAACTATTAGTAATAGTTTCATGAATAAATTAGATA ATAGCGGTATTAAAAATGCTGACCGATAA Protein sequence : MSRSSIPASRRVSRAKAQAFMDSLTGSSYFPNSRRIYLQGKTPSVHVPMREIKLHPTLIGKNGEHYEDNQPIPVYDTSGP YGDPTIAINVRTGLNRLREIWILARQDSEPISNNNNDRQSSDKQLSFTTNYNPRRASYGRCITQLHYARAGIITPEMEFI ALRENMGRERISSNVLHQQHLGSNFGAKKADHITAEFVRQEVAAGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSAV TSSIEEEVEKLVWATRWGADTVMDLSTGSYIHETREWILRNSPVPIGTVPIYQALEKVNGVIENLNWDIFYETLLEQANQ GVDYFTIHAGVLKRYVLLTASRLTGIVSRGGSIMAQWSLVHNQENFLYEHFSEICKLCAAYDIALSLGDGLRPGSVQDAN DEAQFSELHTLGELTKIAWEYDVQVMIEGPGHIPLHMIERNMTDQLKYCHEAPFYTLGPLTTDIAPGYDHFTSGIGAALI GWFGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARMY HDETIPQTAGKLANFCSMCGPKFCSMKLSKKIRNYTNMKNIKTISNSFMNKLDNSGIKNADR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 69 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 69 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 64 |
