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Name : serS (BCI_0318) Accession : YP_588766.1 Strain : Baumannia cicadellinicola Hc Genome accession: NC_007984 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 341775 - 343067 bp Length : 1293 bp Strand : - Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGCTTGATCCATACTTATTACGTCATGATATAAAAATAGTAGCTAAAAAATTAGCTAGCAAAAATTTTTTATTAGCGGT AGATAAAGTTAATCAACAAGAAGCACTCCGTAAACAATTACAAATTAAAAAAGAACATCTACAATTTATACGTAAGTCAA AATCAAGAATAGTTAATCTGGCAAAAGCTAACGGAGAAAATATTACTATACTATGTCAAGAAATTAATCAAATTAATGAA CAATTAAAACAAACAAAATCAGAACTATCTTCATTAAAACAATTAATTAATGACTATATGCTTTTATTACCTAATATTCC AGCTGATGATGTACCTTATGGTAGTGATAAAAAAGATAATATTGAAATAAAACGCTGGGGTGAACCACGTAAGTATAATT TTCCAATAAAAGATCATGTTAATTTAGGTTATATAACGGGTAATATAGATTTTACAGCTGGGGTAAAACTAGCTGGAACA CGTTTTGTCGTAATAAGGGGACAAATTGCTCGTTTATACCGCGCACTATCACAATTTATGTTAGACTTACATACTCAACA ACATGGTTATGAAGAGTACTATTTACCATATTTAGTTAATCGCACTTCGTTATATGGTACTGGCCATTTACCTAAATTTT ATGAAGATTTATTTCATATACAATCTATAAATAAAGAAAATATATCAAATATTTATACTTTAATACCAACAGCAGAAGTA CCATTAATTAATCTACTACGTGATAAAATTTTTGATGAAAATATTTTACCTCTAAAAATGACAGCTAATACACCATGTTT TCGTGCTGAAGCAGGCTCATATGGACGTGATACACATGGTCTAATCAGAATGCATCAATTTGATAAAGTAGAGATGGTTC AGGCTATTAAACCGGAACATTCGATGATAGCACTAGAAGAAATGACTAAGCATGCTGAAAAAGTACTGCAATTATTAAAT CTACATTATCGTAAAGTCTTATTATGCACAGGCGATACAGGTTTTGCATCAAGTAAAACTTATGATCTAGAAGTATGGCT ACCATCACAAAACATTTATTGTGAGGTATCTTCTTGCTCTAATACTAGTGATTTTCAAACACGCCGTGTACTTGCACGTT ATCGTAATAAAAAAGATAAACAATTACGTTTTTTACATACTATAAATGGTTCTGGTTTAGCTATTGGTCGTACTCTTATT GCCATACTAGAAAATTACCAGTTAGCAGATGGAAGAATTGAAGTACCAAAATCACTAAGATCATATATGCAAGGATTAAC TATACTTGGATAG Protein sequence : MLDPYLLRHDIKIVAKKLASKNFLLAVDKVNQQEALRKQLQIKKEHLQFIRKSKSRIVNLAKANGENITILCQEINQINE QLKQTKSELSSLKQLINDYMLLLPNIPADDVPYGSDKKDNIEIKRWGEPRKYNFPIKDHVNLGYITGNIDFTAGVKLAGT RFVVIRGQIARLYRALSQFMLDLHTQQHGYEEYYLPYLVNRTSLYGTGHLPKFYEDLFHIQSINKENISNIYTLIPTAEV PLINLLRDKIFDENILPLKMTANTPCFRAEAGSYGRDTHGLIRMHQFDKVEMVQAIKPEHSMIALEEMTKHAEKVLQLLN LHYRKVLLCTGDTGFASSKTYDLEVWLPSQNIYCEVSSCSNTSDFQTRRVLARYRNKKDKQLRFLHTINGSGLAIGRTLI AILENYQLADGRIEVPKSLRSYMQGLTILG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-91 | 49 |
