Gene Information

Name : mutS (BCI_0209)
Accession : YP_588664.1
Strain : Baumannia cicadellinicola Hc
Genome accession: NC_007984
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 221030 - 223597 bp
Length : 2568 bp
Strand : +
Note : identified by match to protein family HMM PF00488; match to protein family HMM PF01624; match to protein family HMM PF05188; match to protein family HMM PF05190; match to protein family HMM PF05192; match to protein family HMM TIGR01070

DNA sequence :
ATGAAAGAGCTTACAGATAAATCTATCCTTAATCATACTCCTATGATGCAACAATATTGGCAGATAAAAGCTCAGCATTC
TGATGTTTTACTTTTTTACCGTATGGGTGATTTTTATGAATTATTTTATGAAGATGCTAAATTAGCGTCACAGTTAATAG
ATATCTCTTTAACCAAACGTGGTTTCTCTGCTGGTGAACCAATCCCAATGGCAGGGATACCTTATCATGCATTAGATAGC
TATCTAGCTAAACTAGTAGCGCTGGGTAAATCAGTTGCCATTTGTGAACAAGTAGGTGAGCCAACTATCAATAAGGGTCC
AGTAGAACGCCGTGTAGTGCGCATTGTTACTCCTGGTACGCTCAGCGATGAAGTATTATTAAATGAACGCCAGGATAACT
TACTAGCTGCTATGCTGCAAGATAAACAAGGATTTGGGTATGCTACGTTAGACATTACTTCTGGACGTTTTATCGTATCA
GAACCGAAAGATTTCGAGGCTATGGCCGCTGAATTACAGCGTACTAATCCAGCTGAGCTACTTTATCCAGATACGCAACA
TAATTTAGCTTTAATAGAACACCGACGCGGTCTACGACGTAGACCAATATGGGAATTTGAACTAGATACAGCTTGTCAGC
AGCTTATGATTCAATTTGGCACTAGTAGTTTAAAGGGGTTCGGCATTGAGTGTGCCCATCTAGCGCTACGAGCTGCCGGT
TGTTTATTGCAATACGCTAAGGATACTCAACGTACCGCTATGCCGCATATCAGTACTATCACTTTGGAACGACAAGAAGA
TTACGTAGTAATGGATGCTGCAACTATGCGTAACCTTGAGCTAACACATAACCTTAGTGGCGGCATAGAACATACCCTCG
TAGCAGTATTAGATCATACTGTTACTTCTATGGGTAGTAGGATGCTAAAACGCTGGCTACAGATGCCAACTAAACATCTT
ACTACGATTGAAAACCGTCAACAAAGTATTTACTTTTTGCAAGGTAAGTTTGATATTTTACAACCCATACTACGAAAAAT
AGGTGATCTAGAGCGAATACTAGCACGTTTAGCACTACGCTCTGCACGCCCTCGTGATTTAGCTCGCATACGTAATGCTT
TACAACAATTACCAGATATTCAATCGTTATTGGCAGATAATACTAGTGGTATGCATCTGTCTCAATTACTAAGTAATGTC
GGTTATTTCGATAATTTATGCCAGCTATTAGAGCGTGCTATTGTGATATCACCATCAGCATTATTACGTGATGGCGGTAT
AATTGCTACTGGATATAATTTAGAGTTAGATGAGTTACGTGCGCTCGCTAATAATGCTACCGACTATCTAGATATACTTG
AGATGAAAGAGCGTAAACATACTGGTCTAGAAACACTTAAGATTGGTTTTAATGCCGTACACGGATATTTTATACAGCTC
AGTCGTGAGCAGAGTCATCGAGCACCTAAACGCTATATTCGCCGTCAAACACTTAAACATGTAGAACGTTATATTATACC
AGAGCTAAAAGAGTATGAAGATAAAGTAATAACTTCAAAAAGCAAAGCTTTATCGTTAGAAAAAAAATTGTATGATGCAT
TACTAGATATGCTTTTGCCATATTTAACTCAATTACAGCTCAGTGCTACAGCATTAGCGGAATTAGATGTTTTAAGTAAT
TTAGCTGAACGTGCTGATACACTACATTATGTCTGTCCTATGATAAATAATCAGCCGATTATTAATATAATCGATGGGCG
ACATCCAGTAGTAGAACCTTTGATGAGTAAGCCATTTATTGCTAATACTTTATCTTTATCAGACCAAAATCATATGATAA
TTATCACAGGACCTAATATGGGTGGTAAAAGTACTTATATGCGACAAAACGCGCTAATTGTTTTGTTAGCCTACATTGGT
AGCTTTGTGCCGGCATCTCAAGCTATTATAGGACCTATTGATCGTATTTTTACTCGTATAGGCGCTGCCGATGATCTAGT
TTCTGGCCGTTCAACTTTTATGGTCGAAATGACGGAAACAGCAAATATTCTACATAATGCTACTTGCCAAAGTTTAGTTT
TAATGGATGAAATTGGACGAGGGACCTCAACTTATGATGGATTATCGCTAGCTTGGGCTTGTGCAGAAAGCCTGGCTAGT
AGAATTAAAGCTATGACATTGTTTGCTACACATTATTTTGAACTAACGACTCTACCCAATAAAATCAAGGGTATAGTGAA
CGCACATTTTGCAGCTATAGAATATAATGATACTATAGCTTTTATGCATAGTATACAGAATGGAGCTGCGAATAAAAGTT
ATGGCTTGTCAGTAGCTAGTTTAGCTGGGATACCACGCGATGTTATTAAGTGCGCTAGCCGAAAACTACATGAGCTAGAG
AATCTATCGAACAATATAGCATTAACTACTCCGCTGTCGAGCCGCAGCTTACCACAATTTACGCAGGAGACATCGCCAGT
AATCCAAGCTTTACAAGAAATAGATCCTGATAGTTTGTCTCCACGTCAAGCACTTGATCTACTCTACTCTTTAAAGCAGA
TGATTTAG

Protein sequence :
MKELTDKSILNHTPMMQQYWQIKAQHSDVLLFYRMGDFYELFYEDAKLASQLIDISLTKRGFSAGEPIPMAGIPYHALDS
YLAKLVALGKSVAICEQVGEPTINKGPVERRVVRIVTPGTLSDEVLLNERQDNLLAAMLQDKQGFGYATLDITSGRFIVS
EPKDFEAMAAELQRTNPAELLYPDTQHNLALIEHRRGLRRRPIWEFELDTACQQLMIQFGTSSLKGFGIECAHLALRAAG
CLLQYAKDTQRTAMPHISTITLERQEDYVVMDAATMRNLELTHNLSGGIEHTLVAVLDHTVTSMGSRMLKRWLQMPTKHL
TTIENRQQSIYFLQGKFDILQPILRKIGDLERILARLALRSARPRDLARIRNALQQLPDIQSLLADNTSGMHLSQLLSNV
GYFDNLCQLLERAIVISPSALLRDGGIIATGYNLELDELRALANNATDYLDILEMKERKHTGLETLKIGFNAVHGYFIQL
SREQSHRAPKRYIRRQTLKHVERYIIPELKEYEDKVITSKSKALSLEKKLYDALLDMLLPYLTQLQLSATALAELDVLSN
LAERADTLHYVCPMINNQPIINIIDGRHPVVEPLMSKPFIANTLSLSDQNHMIIITGPNMGGKSTYMRQNALIVLLAYIG
SFVPASQAIIGPIDRIFTRIGAADDLVSGRSTFMVEMTETANILHNATCQSLVLMDEIGRGTSTYDGLSLAWACAESLAS
RIKAMTLFATHYFELTTLPNKIKGIVNAHFAAIEYNDTIAFMHSIQNGAANKSYGLSVASLAGIPRDVIKCASRKLHELE
NLSNNIALTTPLSSRSLPQFTQETSPVIQALQEIDPDSLSPRQALDLLYSLKQMI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_588664.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 69