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Name : clpB (BCI_0194) Accession : YP_588651.1 Strain : Baumannia cicadellinicola Hc Genome accession: NC_007984 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 206290 - 208878 bp Length : 2589 bp Strand : + Note : identified by similarity to SP:P03815; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724 DNA sequence : ATGCGTCTAGATCGTTTTACAAATCAATTTCAACAAGTTCTCATAGATGCTCAGTCATTGGCTCTTAGGTACGCTAATCA GTTCATAGAGCCATTACACGTTATGGTTATTTTACTTCAGCAAGAAGGTAGCTCAGTATACCAATTACTACAGTATGCTG GTGTTAACACTGCGAGATTAAGTTTAGCAGTTGAACAGGCTTGTAAGCAATTGCCCCATCAGCAAATTAACAGTAACAAC GGTAACTTACCACCTTCCCAGTATTTAGTAAGTGTATTAAATATGTGTGAAACGCTTGCAAACAAACGTTCTGAAAAATT AATTTCATCTGAATTATTTATTCTGGCATCAATTAATTCGCGAGGACGCTTAGCAGAACTACTACAAGCTGCTGGTGCTA CAACAATATTAATTGAACAAGCAATAGATTACCTACGGGAAAGTAAAAAAGTAGATAATCTAGATACGGAAAATCAGTGT CAAAAAGCCCTCAAGCAATTTACTATTAATCTCACAGAGCTTGCAGAACAGGGAAAGTTAGATCCAGTTATTGGTCGTGA TGAAGAAATCCGCCGTACCATCCAAGTATTGCAACGACGCACGAAAAATAACCCAGTACTTATTGGCGAACCAGGAGTAG GTAAAACTGCTATAGTAGAAGGGCTTGCTCAGCGCATCGTGAACGGTGAAGTTCCTGAAGGACTGAAAAATAATCGGGTA CTGTCATTAGATATGGGAGCACTAGTAGCTGGTTCTAAGTACCGAGGTGAATTTGAAGAACGATTAAAAGCTGTACTTAA TGAACTATCAAAATTAGAAGGTAATATCATTTTGTTCATTGATGAATTACATACTATGGTCGGCGCGGGTAAGGCAGACG GTGCAATGGATGCAGGTAATATGCTGAAGCCAGCACTTTCACGTGGTGAACTACATTGTGTTGGTGCTACAACTCTAAAT GAATACCGTACATTTATTGAGAAGGATGCTGCACTAGAAAGGCGTTTTCAGAAAGTATTTATAGTTGAGCCTAGTGTTGA AGATACTATTGCTATCTTACGGGGTCTTAAGGAGCGATATGAGCTACATCATCACGTACAGATTACTGATCCAGCTATAG TTGCAGCGGCAATGTTATCTAACCGTTATATCGCCGATAGGCAATTACCTGACAAAGCTATTGATTTAATCGATGAGGCT GCTTCTAGTATCCGTATGCAAATTGACTCTAAACCAGAAGAACTAGATCGCCTAGAACGACGCATGATTCAATTAAAGCT AGAACAACAGGCACTACAGAAAGAACTAGATGATGCTAGCCTAAAACGTCTCAAGATACTTAATAAAGAGCTAGCGCAAA AAGAACATGCTTATGCTAAACTAGAGAAAGAATGGCAAGCGGAGAAAGTTTCTTTATCTGGTGCGCAAAAAATTAAATCA GAGTTAGAACAAACGAAAATTTACCTCGAGCAAGCACGTCGTATCGGCGATCTAGCCAGAATGTCGGAACTACAATATGG CAAAATTCCTGAGTTAGAAAAAAAACTTGCAGTAGTTTTGCAATCAGAAGGTAAAAATATGCGCTTGTTACGTAACCGCG TAACAGAGATGGAAATCACTGAGGTATTAGCGCGATGGACTGGTATCCCAGTATCACGCATGCTAGAAAGCGAGCGCACA AAAATTTTACGGATAGAACAATATTTACATCAAAGAGTAGTAGGTCAAAATGAAGCAGTAGAAGCAGTTTCTAATGCTAT TAGACGTAGTAGAGCTGGTATTGCAGACCCTAATAGACCAATTGGTTCTTTTATGTTTCTAGGACCTACTGGAGTAGGAA AAACTGAACTATGTAAAGCTTTAGCCGCTTTTGTTTTTGATAGTGATACTGCCATCGTACGTATAGATATGTCAGAGTTT ATGGAACGACATTCAGTATCGCGGATGGTAGGGGCTCCTCCAGGATATATTGGCTACGAAGAAGGTGGATCGCTTACTGA GGCTGTGCGCCGTAGACCTTACTCAGTTATTCTACTAGATGAAATAGAGAAAGCTCATATTGATATTTTCAATCTCTTAC TTCAATTGTTAGAAGATGGTAGGTTAACTGATGGCCATGGCAGGACGGTTAATTTCCGTAATACCATAGTTATTATGACA TCTAACTTAGGATCTGATGTAATTAATGAACGTTTTCATCAAATTAATTACCATGATATGAAAAATATCGTTGTTGATGT TGTTTGCCATCATTTTCGCCCGGAATTTATTAATAGAATAGATGAAATTGTCGTTTTTCATCCACTAGGCCATGAAGATA TGCTGAAAATAGCACAGATACAACTACAGCGTCTGTCAAAACGTTTAGAGGAACAGGGAATATCAATTACTATAAGCGAT CAAGTACTGACTTTATTAGTTAAAACTGGTTTTGATTTTATTTATGGCGCTCGGCCTCTAAAGCGTGCTATACAACAGAA AATAGAAAATCCATTGTCACAACAAATATTATCTGGGAGTTTACTACCAGGTAAAAAAATTAAAATTGATGTAAATAATG ATAATATTATTGTAATTGATTATGATTAG Protein sequence : MRLDRFTNQFQQVLIDAQSLALRYANQFIEPLHVMVILLQQEGSSVYQLLQYAGVNTARLSLAVEQACKQLPHQQINSNN GNLPPSQYLVSVLNMCETLANKRSEKLISSELFILASINSRGRLAELLQAAGATTILIEQAIDYLRESKKVDNLDTENQC QKALKQFTINLTELAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNNRV LSLDMGALVAGSKYRGEFEERLKAVLNELSKLEGNIILFIDELHTMVGAGKADGAMDAGNMLKPALSRGELHCVGATTLN EYRTFIEKDAALERRFQKVFIVEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNRYIADRQLPDKAIDLIDEA ASSIRMQIDSKPEELDRLERRMIQLKLEQQALQKELDDASLKRLKILNKELAQKEHAYAKLEKEWQAEKVSLSGAQKIKS ELEQTKIYLEQARRIGDLARMSELQYGKIPELEKKLAVVLQSEGKNMRLLRNRVTEMEITEVLARWTGIPVSRMLESERT KILRIEQYLHQRVVGQNEAVEAVSNAIRRSRAGIADPNRPIGSFMFLGPTGVGKTELCKALAAFVFDSDTAIVRIDMSEF MERHSVSRMVGAPPGYIGYEEGGSLTEAVRRRPYSVILLDEIEKAHIDIFNLLLQLLEDGRLTDGHGRTVNFRNTIVIMT SNLGSDVINERFHQINYHDMKNIVVDVVCHHFRPEFINRIDEIVVFHPLGHEDMLKIAQIQLQRLSKRLEEQGISITISD QVLTLLVKTGFDFIYGARPLKRAIQQKIENPLSQQILSGSLLPGKKIKIDVNNDNIIVIDYD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-158 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_588651.1 | ATP-dependent chaperone protein ClpB | VFG0079 | Protein | 5e-163 | 45 |
