Gene Information

Name : ssb (BCI_0107)
Accession : YP_588579.1
Strain : Baumannia cicadellinicola Hc
Genome accession: NC_007984
Putative virulence/resistance : Virulence
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 118286 - 118783 bp
Length : 498 bp
Strand : -
Note : identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence : 
ATGGCCAGTAGAGGTGTTAATAAAGTTATTTTAGTTGGAAATTTAGGACAAGATCCAGAAATCCGCTACATGCCTAATGG
TTGTGCGGTGGCTAATATTAACCTAGCAACTTCAGAGAGCTGGCGTGATAAACAGACCGGGGATACTAAAGAAAAAACAG
AGTGGCATCGTGTAGTGTTGTTTGGTAAACTTGCAGAAGTTACTGGTGAATACCTACGCAAAGGTTCTCAAGTATATATA
GAAGGTTCTTTACAAACACGTAAGTGGCAAGATCAAAATGGTCAAGATCGCTATACTACAGAAATAATAGTTAATGCTAA
TGGTAGCATGCAGATGCTAGGTACTCGTCAGAGTAACTGGGTACAACCACAAAATTTAAGCAACGATAATCAGAATAGTA
GTACTCCTACTGTCCGATTAAGTAGTTTAGCACCGAATAAAATACAAGATATGGGTAATGAGCAGCCAATTGAATTTGAT
GATGAGATTCCATTCTAA

Protein sequence : 
MASRGVNKVILVGNLGQDPEIRYMPNGCAVANINLATSESWRDKQTGDTKEKTEWHRVVLFGKLAEVTGEYLRKGSQVYI
EGSLQTRKWQDQNGQDRYTTEIIVNANGSMQMLGTRQSNWVQPQNLSNDNQNSSTPTVRLSSLAPNKIQDMGNEQPIEFD
DEIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 6e-48 62
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 9e-48 62
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 9e-48 62
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 4e-33 55
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 2e-34 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_588579.1 single-strand binding protein VFG0576 Protein 1e-42 61