Gene Information

Name : troB (BCI_0106)
Accession : YP_588578.1
Strain : Baumannia cicadellinicola Hc
Genome accession: NC_007984
Putative virulence/resistance : Virulence
Product : cation ABC transporter, ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 117359 - 118201 bp
Length : 843 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
GTGGTATATTTTGTTTGCAAAAAATTCTTATTCCGCTCCAGCAATGTTTATTACTGCCGCCGGTTTTACACGTATGCTAC
TGGCACTAACTGCTATATTGCTACTATGGACAGCAATTTTTTGGTCACTAATGCTACCGTGATACAACTAAAGCAATTAC
TAATAGGATATAATCGCAAAAGTATAGGTAAACCAGTAACTGGTAGATTTAAACGTGGTAGTATGACTGCTATTATAGGT
GTAAATGGTAGTGGTAAATCAACTTTACTACAAACTATCGCTGGATTATTATTTCCCGTATCAGGAAAGATAGAATTTTG
TCAAGAAGGTCGACCACGTATTGGCTACCTACCACAACAAACTGAAATTGATCGTCAATTTCCACTAAAAGTATTTGAAG
TAGTTTCAATGGGTTGTTGGCCTGCGACAAGTATACTTAGCAGCATAAATAATGAGCAAAAAATTTTTATCTGGAATAGC
TTAAAGCAAGTTGGATTAGATAATAAAGCCTTTGATAATATTGGTTCATTATCTAATGGAGAATTTCAACGTATGTTATT
TGCTAGGTTACTAGTACAACAAGCGCCATTAGTTTTATTAGATGAGCCTTTTACAAGTATAGATAGCAGTACTTCTAGCA
TACTTTTGACTATAATTACACAATTACATCAGCAAGGATCTACACTAATAGTAGTATTACATGATTATATGTTAGTAGCA
AAATATTTTCCTACAACATTATTACTATCTCCTATACATAATGCATGGGGATCTTCGGCAGATATATTAAAGCAATTTAT
AATACCAACTATGGCCGTAAGGCAACAACAGAGGATCTTATAA

Protein sequence :
MVYFVCKKFLFRSSNVYYCRRFYTYATGTNCYIATMDSNFLVTNATVIQLKQLLIGYNRKSIGKPVTGRFKRGSMTAIIG
VNGSGKSTLLQTIAGLLFPVSGKIEFCQEGRPRIGYLPQQTEIDRQFPLKVFEVVSMGCWPATSILSSINNEQKIFIWNS
LKQVGLDNKAFDNIGSLSNGEFQRMLFARLLVQQAPLVLLDEPFTSIDSSTSSILLTIITQLHQQGSTLIVVLHDYMLVA
KYFPTTLLLSPIHNAWGSSADILKQFIIPTMAVRQQQRIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 2e-38 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
troB YP_588578.1 cation ABC transporter, ATP-binding protein VFG1496 Protein 1e-38 46