Gene Information

Name : ecpD (Rmet_4251)
Accession : YP_586386.1
Strain :
Genome accession: NC_007974
Putative virulence/resistance : Virulence
Product : pilus chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 837241 - 837993 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence : 
ATGATCATGACACGCACGCGGATGATTCGATATGTCTGGACCACGACTTTGCTGCTGGTACTCGGTCTGGCCGTTGTGTT
GCAGGCCGAGGCATCGGTGGTCCTTGCCGGCACGCGCGTGATTTTTAACGCCAATGAGCGTGAGACGACGGTCAGGCTGA
GCAACGAGGGCAAGGTGCCAGCGCTCACGCAGGTGTGGCTGGACAAGGGCGATCCCAAAGCGGCACCCTCGGAGATCTCC
GTGCCGTTCACGGTAACACCGCCGGTATCGCGCATCGACCCTGGTAAGGGGCAGACGCTGCGGATCTTTTATACCGGTGA
GGCGCTGCCGCGGGACAAGGAATCGGTCTTCTGGCTGAACGTGCTGGAGATTCCGCCCGAAGCCAGTGGGGAGGCCAACA
AGCTGCAACTGGCCTTCCGCACGCGCATCAAGCTCTTCTTCCGGCCGGCCGGGCTGGCCGGCACGGCGCAGGATGCGCCA
GCCAAGACCGAGTGGCGGTTGCTGCCGGGCGGCAAGCAGGTGCAGGTTCGCAATCCAACGCCGTACTTCATCTCGTTCTC
TGCTTTCGAGATCGAGGGCAATGGCAAGTCGGTGAAATTCGATGATGGCGGCATGGTCGGCCCCGGAGACACACAGGTGT
TTGCGCTGAACACCGCTGCGACTCCCGCGCCCGGCCTGAAGGTTCACTACCACGCCATCAGCGACTTTGGTGGCGCCATT
GACGGAGAGGCCGCGCTCGCCGTCACTCCATGA

Protein sequence : 
MIMTRTRMIRYVWTTTLLLVLGLAVVLQAEASVVLAGTRVIFNANERETTVRLSNEGKVPALTQVWLDKGDPKAAPSEIS
VPFTVTPPVSRIDPGKGQTLRIFYTGEALPRDKESVFWLNVLEIPPEASGEANKLQLAFRTRIKLFFRPAGLAGTAQDAP
AKTEWRLLPGGKQVQVRNPTPYFISFSAFEIEGNGKSVKFDDGGMVGPGDTQVFALNTAATPAPGLKVHYHAISDFGGAI
DGEAALAVTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 3e-51 51
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 6e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ecpD YP_586386.1 pilus chaperone VFG0007 Protein 8e-42 47
ecpD YP_586386.1 pilus chaperone VFG1468 Protein 3e-42 42