Gene Information

Name : kdsB (Rmet_5734)
Accession : YP_587862.1
Strain :
Genome accession: NC_007974
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 2494108 - 2494851 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence :
ATGACACGGCAGGATGGCGAGAGCGTTGTCATCGTCATTCCCGCGCGCTACGGATCGACGCGCTTGCCTGGCAAGCCGTT
GCTGGATATTGCCGGCAAACCGATGATTCAGCACGTCTATGAGCGTGCACGTTTGGTGCGCGGCGTAAATGCCGTGGTGG
TTGCCACGGATGACTCGCGCATCGAGTCGGCGGTTCTGGCATTCGGCGGGAGCTGTCTGATGACGTCCGCCGGGCACCAG
TCGGGAACTGACCGCCTTTGCGAAGTCATGCGCATGGTGCACGCGGACCTCTACATCAACTTGCAGGGTGACGAGCCGCT
GGTGCGTCCAACGGACATCGAACTGCTGGCGAACCTGATGATCGCCGATCCGACCTCCGACGTAGGCACGCTTTGCCATG
AGTTCTCGCTGGAGGAAGCCCGCGACGAAAATGCCGTGAAGGTGGTGATGTCGAACGAAGGTGATGCGCTGTACTTCAGT
CGCTCATTGATCCCCTACCCGCGCGATGGCGCCTTTGCGCGCTACTACAAGCATTCGGGTGTCTACGCTTTTCGGAGAAG
GGTGCTTGAGGTCTACGGGAGCATGCCCCAGCCGATGGCCGAACAAGCGGAGCGGTTGGAGCAATTGAGGCTGCTTGCGG
CAGGCTTCCGCATACGGATGCAGGTGGTGCCTCCCATCGGAACTGGTGTCGATACTCCCGCTTGCCTGGAGCGTGTCCGG
GCCATTCTTGATCCCGCTGTTTGA

Protein sequence :
MTRQDGESVVIVIPARYGSTRLPGKPLLDIAGKPMIQHVYERARLVRGVNAVVVATDDSRIESAVLAFGGSCLMTSAGHQ
SGTDRLCEVMRMVHADLYINLQGDEPLVRPTDIELLANLMIADPTSDVGTLCHEFSLEEARDENAVKVVMSNEGDALYFS
RSLIPYPRDGAFARYYKHSGVYAFRRRVLEVYGSMPQPMAEQAERLEQLRLLAAGFRIRMQVVPPIGTGVDTPACLERVR
AILDPAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-64 63
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-64 63
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-64 63
unnamed AAK15335.1 unknown Not tested Not named Protein 7e-26 41