Gene Information

Name : kpsT (Rmet_5731)
Accession : YP_587859.1
Strain :
Genome accession: NC_007974
Putative virulence/resistance : Virulence
Product : Polysialic acid transport ATP-binding protein kpsT
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 2491237 - 2491902 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence : 
ATGATCGAGCTACGACAGGTCTGGAAGCGCTACAGCGGCCATCACAGTCGCAACTGGGTGCTCCGGGATATCAACCTCTG
TATCCGCCAGGGCGATCGTGTCGGCTTGATTGGTCGCAACGGTGCAGGCAAGTCAACCCTTCTTAACCTGATCGGCGGGA
TGGATCATCCGAGCCGCGGCCAGGTTCGCCGCGACGGCAAGCTTTCATGGACCCTTGGGCTGAACGGAGGCTTCCAAGGT
GCGCTCTCCGGAGAACAGAACGCTCGCTTCGTGTTTCGCATCCACGGCGTGCCGGACCAGGAGATCGCTGAGCGCACGAA
CTTCGTGCATGTTTTCTCCGAGTTGGGCGATTACTTCTTCGCGCCAATGAAAACATACTCGTCCGGGATGCGCTCGCGGC
TTGCCTTCGCTCTATCACTGGCTTTCCGATTCGACACCTACCTCGTCGACGAGCTCATCGCGGTCGGCGATGAGAAATTC
AAGAAAAAGTCGAAGAAGGCATTTGAGGATCTCATTGCTTCCGCGGGGCTGATCATGGTCAGCCACGACGAGGGAACGCT
CAAAAATTTTTGCGAGAAGGGAATCCTTATGAGCAATGGCGCCGCCTACTGGTTCGACGACATTGCAGATGCCCTCTCCG
AGTACAAGAAAAGTATAAACGCATGA

Protein sequence : 
MIELRQVWKRYSGHHSRNWVLRDINLCIRQGDRVGLIGRNGAGKSTLLNLIGGMDHPSRGQVRRDGKLSWTLGLNGGFQG
ALSGEQNARFVFRIHGVPDQEIAERTNFVHVFSELGDYFFAPMKTYSSGMRSRLAFALSLAFRFDTYLVDELIAVGDEKF
KKKSKKAFEDLIASAGLIMVSHDEGTLKNFCEKGILMSNGAAYWFDDIADALSEYKKSINA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 9e-48 49
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 3e-45 45
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 6e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_587859.1 Polysialic acid transport ATP-binding protein kpsT VFG1449 Protein 3e-48 49
kpsT YP_587859.1 Polysialic acid transport ATP-binding protein kpsT VFG0258 Protein 2e-42 44
kpsT YP_587859.1 Polysialic acid transport ATP-binding protein kpsT VFG0696 Protein 8e-41 42