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Name : kpsD (Rmet_5729) Accession : YP_587857.1 Strain : Genome accession: NC_007974 Putative virulence/resistance : Virulence Product : polysaccharide export protein, polysialic acid transport protein kpsD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 2488303 - 2490123 bp Length : 1821 bp Strand : - Note : - DNA sequence : ATGAAACGAATTGCCTGCTGCCTCGTCGCCGCATCTCTGCTCTTCTCATGGGCAGTGCACGCGCAGACGCCCAACGTTCC GCTATCCATGCTACCCAACGCACTGCTCGGACTAACGTCCAGCTCGGATAGCAGTCCCTCGACTGACGTCGCCACTGGCC AAGGCGCGGCAGCACCTGCCTGGCAAAGCGGCCAACCGAGTATCTCTGGCCTGCAATCTCCGATGATTACGGGCGGCACG CCTTTGCCGGGTACCGGGCAGATCCAGCCGCCGTTGCCGAATATCGGTGCGCAGGCATATATCCCTGCGCAGCGGCTGGG CGACTACGACGCCAACCAGAAGAGCGAGGTCTTCGGCACTCAGCTATTCACCGGCGCATTCGCCCGCAGCGCGCCATCCA CCTTCAATCCTGACTACGCTGTTGCCATCGGTGACGGCGTGCGCGTCAGGATCTGGGGCGGGTTCGATTTTGACAGCGTG CTTACTGTCGATTCGCAGGGCATGATCTTCCTGCCTCATTGTGGACCAATGCGTGTAGCTGGCATTCACAACCGCGACCT GCAAGCGGCGGTTACCGGTGCGCTGCGCAAGGTCTTCAGTAGTAATGTTTCCATCTACGCGAGTCTTGCCTCGGCGCAGC CCGTTCGCGTGCTGGTCTCCGGCTTCGTCCGCCATCCCGGCATGTACGAAGGAACGGGGAACGACAATGTGCTGCGCTAT CTGGACATGGCCGGTGGCGTAGATCCGGACCGGGGTTCCTTCCTGGATATCCAGGTCAAGCGCGGGGCCACAGTACGCTA CAACGTCGATCTCTATCGCTTCTTGTTGAATGGCGACCTGCCGAGTACGCCCCTGACAGATGGCGACGTGATCTTCGTTG GTCAGCGGAAGAACACAGTGATGGTCGGCGGCCTGGCAGCGAGCGCCAGGCGTTTTGAATTCAACGGTACCACCACGCTG GCCCAGATCGCAGCCGCTGCGCGGCCGGACGCCACCTCTACCAACGTGCGCGTCACGCGTGGATCGGGAACGGTGCAGCA CGTTGAGTACTATCCGCTAAGCAAGACACCAGACGTCACCCTGATGAATGGCGATCTCGTCGAGTTCACAGCCGACAAGC GGCCCGGCACGATTACGGTTCGGGTGGAAGGCGAGCACCTGGGTCCACAGGAGTATGTCGTGCCTTATGGCACCAAGCTG GGCGACCTACTGGGTCGCGTGGAGATGACATCCAACTCGCTGCCGGAGAGCACGCAACTCTTTCGTCAAAGCGTGAAGGA TCGGCAGGCAAAGATGCTCGATACCTCGCTCACGCAGTTGCAAAACAGCGTGCTTACAGCACGCTCCGGAACTAACGAGG AATCCCAGCTGCGCCAGCGCGAGGCTGCCCTGGTTCTGCAATGGGTGGACCGCGCGCGCCACATTGATCCCTCCGGTCAA GCAGTCATCGGCCATGGCGAGGAACGCAGCGCCCTGCTGCTGGAGAACGGTGACCGACTGAGGATCCCCACTCGCAACGA TCTCGTGTTGATTGGCGGTGAAGTCCTGTTCCCGAACTCGTTCGTGTTCAAACCTGGTGCCAATGTCCAGCGTTACATTC AGCAGGCAGGTGGATACACGCAGAACGCTGACAGCTCACGCGTCATCATCGCCCATCTTGACGGTACGTTTGTCGATGCG CGCCAGGACGATACCGTGATGCCGGGAGACCAGATCATGATCCTGCCCAAGGTGGACTTCAAGACGATGCAGTTTGCCAA GGACGTTTTTTCCATTCTCTACCAGATCGCCATCGCCGCGAAGGTGGCAATAGGTCTCTGA Protein sequence : MKRIACCLVAASLLFSWAVHAQTPNVPLSMLPNALLGLTSSSDSSPSTDVATGQGAAAPAWQSGQPSISGLQSPMITGGT PLPGTGQIQPPLPNIGAQAYIPAQRLGDYDANQKSEVFGTQLFTGAFARSAPSTFNPDYAVAIGDGVRVRIWGGFDFDSV LTVDSQGMIFLPHCGPMRVAGIHNRDLQAAVTGALRKVFSSNVSIYASLASAQPVRVLVSGFVRHPGMYEGTGNDNVLRY LDMAGGVDPDRGSFLDIQVKRGATVRYNVDLYRFLLNGDLPSTPLTDGDVIFVGQRKNTVMVGGLAASARRFEFNGTTTL AQIAAAARPDATSTNVRVTRGSGTVQHVEYYPLSKTPDVTLMNGDLVEFTADKRPGTITVRVEGEHLGPQEYVVPYGTKL GDLLGRVEMTSNSLPESTQLFRQSVKDRQAKMLDTSLTQLQNSVLTARSGTNEESQLRQREAALVLQWVDRARHIDPSGQ AVIGHGEERSALLLENGDRLRIPTRNDLVLIGGEVLFPNSFVFKPGANVQRYIQQAGGYTQNADSSRVIIAHLDGTFVDA RQDDTVMPGDQIMILPKVDFKTMQFAKDVFSILYQIAIAAKVAIGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsD | YP_854331.1 | polysialic acid transport protein KpsD precursor | Not tested | PAI I APEC-O1 | Protein | 3e-106 | 42 |
| kpsD | CAE85212.1 | KpsD protein | Virulence | PAI V 536 | Protein | 3e-106 | 42 |
| kpsD | AAZ04468.1 | polysialic acid transport protein precursor | Virulence | PAI I APEC-O1 | Protein | 2e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsD | YP_587857.1 | polysaccharide export protein, polysialic acid transport protein kpsD | VFG1448 | Protein | 1e-106 | 42 |
