Gene Information

Name : Rmet_5331 (Rmet_5331)
Accession : YP_587459.1
Strain :
Genome accession: NC_007974
Putative virulence/resistance : Virulence
Product : transcriptional regulator two components regulatory system
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2043417 - 2044094 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence : 
ATGAGGATCCTATTGGTAGATGACGACCAGAAGGCAGCGCGACTGCTGGCCCGTGGTCTGCAAGAAGAAGGTTATGACGT
GGAGACCGCCCATTCGGTTGACGTGGCGGCGGCTCACAATTGTTACGCGTTCAGTCTGCTGATTCTCGACTGGATGCTCC
CGGGCAAAAGTGGCGTCGAGTTCTGCCGGGAATTGCGCGAGCAGGGCGTGCGCACGCCGATCCTGATGCTGACGGCGCGC
GATGCAATCAATGACCGCATCACCGGGCTGGACACGGGCGCCGACGACTATCTGACCAAACCCTTCGTCTTTGAGGAACT
GCTCGCGCACGTGCGGGCCCTGCTGCGGCGTGTGGAGCTGGCCCAACCCGCCCCGATCACGCTGAACGACCTTGTCATCG
ACCCGCAGACCCGTGGCGTCACGCGGGCCGGCGCGCGGCTCGATCTCACGCCGAAGGAGTACGCGATCCTCATCCTGCTG
GTGACGCACGCCGGGGAGATCGTCAGCCGGGCACAGCTTGCGGAACACATCTGGCACGCGGACCTGATCGCCATCGACAA
CCTGATCGACGTGCACATGAAGAACCTGCGCCGCAAGCTCGACCCACCGGGCATGGCGGCGCTGATCCAAACCGTGCGGG
GCCAGGGCTTCCGCATCTCGCCATCGGGGGCCCTCTGA

Protein sequence : 
MRILLVDDDQKAARLLARGLQEEGYDVETAHSVDVAAAHNCYAFSLLILDWMLPGKSGVEFCRELREQGVRTPILMLTAR
DAINDRITGLDTGADDYLTKPFVFEELLAHVRALLRRVELAQPAPITLNDLVIDPQTRGVTRAGARLDLTPKEYAILILL
VTHAGEIVSRAQLAEHIWHADLIAIDNLIDVHMKNLRRKLDPPGMAALIQTVRGQGFRISPSGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-29 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmet_5331 YP_587459.1 transcriptional regulator two components regulatory system BAC0638 Protein 6e-26 42
Rmet_5331 YP_587459.1 transcriptional regulator two components regulatory system BAC0308 Protein 1e-32 42
Rmet_5331 YP_587459.1 transcriptional regulator two components regulatory system BAC0197 Protein 3e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmet_5331 YP_587459.1 transcriptional regulator two components regulatory system VFG0596 Protein 9e-30 42
Rmet_5331 YP_587459.1 transcriptional regulator two components regulatory system VFG1390 Protein 3e-32 42
Rmet_5331 YP_587459.1 transcriptional regulator two components regulatory system VFG0473 Protein 1e-22 41