Gene Information

Name : fliP (Rmet_5301)
Accession : YP_587429.1
Strain :
Genome accession: NC_007974
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2003207 - 2004001 bp
Length : 795 bp
Strand : +
Note : -

DNA sequence : 
ATGAACTCGCTGCGTGCCGACGTCGCACGGCATCCCGCGCGCCTGCCGCGCGTGGCCGCCACCCTGCTGGCATTGCTGCC
GCTCGTGCTGTGGCTCGCGCCCGAATCGGCGCTGGCCCAGTCGCTGCCCGGCGTGACCAGCCGGCCGGGACCCGGCGGCG
GCCAGACCTGGTCGCTGTCGATCCAGACGCTGGTCCTGTTGACATCGCTGTCGTTCCTGCCGGCGGCCATGCTGATGATG
ACGGGCTTCACTCGCATCATCATCGTGCTGGGCCTGTTGCGCAACGCGCTGGGTACGGCATCGTCGCCGCCCAACCAGGT
ACTCGTGGGCCTGTCGCTGTTCCTGACGTTCTTCGTCATGTCGCCGGTGTTCGACAAGGTCTACACCGACGCCTACCAGC
CGCTCTCCGAAAACAAGATCAGCCTCGAGACCGCCGCCCAGCGCGCCGCCGTGCCGCTGCGCGCGTTCATGCTGCGTCAG
ACTCGCGAGAAGGACCTGGCGATGTTCGCGCAGATGGCCAAAACGCCCGAACTGCAGGGCCCCGAGGACGTGCCGTTCAC
GGTGCTGGTGCCGGCGTTCGTCACCAGCGAACTGAAGACCGCGTTTCAGATCGGCTTTACGATCTTCATCCCGTTCCTCA
TCATCGACCTCGTCGTGGCCAGCGTGCTGATGGCGATGGGCATGATGATGGTGCCACCCGCCACCATTTCGCTGCCGTTC
AAGCTGATGCTGTTCGTGCTGGTCGATGGCTGGCAACTGCTGCTGGGCTCCCTGGCGCAGAGCTTCATGAACTGA

Protein sequence : 
MNSLRADVARHPARLPRVAATLLALLPLVLWLAPESALAQSLPGVTSRPGPGGGQTWSLSIQTLVLLTSLSFLPAAMLMM
TGFTRIIIVLGLLRNALGTASSPPNQVLVGLSLFLTFFVMSPVFDKVYTDAYQPLSENKISLETAAQRAAVPLRAFMLRQ
TREKDLAMFAQMAKTPELQGPEDVPFTVLVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISLPF
KLMLFVLVDGWQLLLGSLAQSFMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-31 44
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 4e-29 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 6e-29 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 6e-29 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 6e-29 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-32 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 4e-33 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 4e-33 42
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 3e-31 42
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 2e-31 42
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 3e-31 42
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 9e-30 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 9e-30 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-31 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 1e-32 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 9e-33 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 1e-32 41
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 5e-19 41
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 5e-19 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 3e-20 41
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 1e-30 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 1e-30 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 5e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_587429.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-82 77
fliP YP_587429.1 flagellar biosynthesis protein FliP VFG2494 Protein 2e-78 73
fliP YP_587429.1 flagellar biosynthesis protein FliP VFG1259 Protein 5e-65 61
fliP YP_587429.1 flagellar biosynthesis protein FliP VFG2016 Protein 5e-60 57
fliP YP_587429.1 flagellar biosynthesis protein FliP VFG0519 Protein 1e-31 42
fliP YP_587429.1 flagellar biosynthesis protein FliP VFG0044 Protein 1e-33 42
fliP YP_587429.1 flagellar biosynthesis protein FliP VFG0188 Protein 1e-31 42