|
Name : gabD (Rmet_4942) Accession : YP_587073.1 Strain : Genome accession: NC_007974 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I, NADP-dependent Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1607058 - 1608506 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGCAACTCAAGGACCCTTCGCTGTTCAAGCAACTGGCCTATGTCGACGGTCAATGGATCAGCGCCGATTCGGGCGCCAC GTTCGACGTCACGGACCCGGCCACTGGCGAGGTCATCGCCCGGGTGGCCGACCTGGGTGCTGCCGAGACCACGCGCGCCG TTGCTGCCGCGGAAGTCGCCCAGAAAGCCTGGGCGGCAAAGACCGGCAAGGAGCGCGCCAATATCCTGCGCCGCTGGTTC GACCTGATGTTGGCCAATACCGACGACCTGGCCTACCTGATGACGCGCGAGCAAGGCAAGCCGCTGGCCGAGGCCAAGGG CGAGATCGCCTACGCCGCCAGCTTCATCGAGTGGTTCGCCGAGGAAGCCAAGCGCGTGGACGGTGAAGTGCTGGCCACGC CTGCCGCCGACAAGCGGCTGGTCACGCTGCGCCAGCCGGTAGGTGTGTGCGCCGCGATCACCCCGTGGAACTTCCCGGCC GCGATGATTACGCGCAAGGTGGCGCCGGCGCTGGCCGCTGGCTGCGCGATCGTGATCAAGCCGGCCGAACTGACGCCGCT GTCCGCATTCGCGCTGGCCGAACTCGCGCATCGCGCCGGCGTGCCGGCAGGCGTGCTGCAAGTTGTCACCGGTGACGCCC GGAACATTGGTGGCGTGCTGACGGCCAGCCCGATCGTGCGCAAGCTGTCGTTCACGGGCTCGACGGAAGTGGGCCGCATC CTGATGGCTCAGTCGGCGCCGACCATCAAGCGCCTGTCGCTCGAACTCGGTGGCAATGCGCCGTTCATCGTCTTTGACGA TGCCGACGTCGATGCGGCCGTGGAAGGCGCGATCGTCGCCAAGTACCGCAACGGCGGCCAGACCTGCGTGTGCGCGAACC GCTTCTACATCCAGGACGGCATTTACGATGCGTTCGCCGCTAAGTTTGCCGAGCGCACCGCTCAGCTGCGTGTCGGCAAC GGGCTCGAGGCAGGCGTGGTGATCGGCCCGCTGATCGAGGACGCCGCGATCGAGAAGGTGAATTCGCTGGTCGAGGATGC CACGTCAAAGGGCGGCAAGGTACTGGCCGGTGGCGGCAAGCACCCGCTCGGCGGAACGTATTACACGCCGACCGTGATCG GCAATGCCACCGCCGACATGCGCATGGCGCGCGAAGAAATCTTCGGGCCGGTGGCACCGCTGTTCCGCTTCAAGCAGGAC GACGAAGCCGTTGCCGCCGCCAACGCCACCGAGTATGGCCTGGCCGCCTATCTCTACACCCGCGACATCTCGCGCGCATG GCGCACCGCCGAGGCGCTGGAGTACGGCATGGTCGGCCTGAACACGGGCCTGATCTCCAACGAGGTGGCACCGTTCGGCG GCATCAAGCAATCCGGCGTCGGCCGCGAAGGCTCGCGCCACGGCATCGAGGAATACCTCGAGATCAAGTATCTTTGCCTG CAGATGTGA Protein sequence : MQLKDPSLFKQLAYVDGQWISADSGATFDVTDPATGEVIARVADLGAAETTRAVAAAEVAQKAWAAKTGKERANILRRWF DLMLANTDDLAYLMTREQGKPLAEAKGEIAYAASFIEWFAEEAKRVDGEVLATPAADKRLVTLRQPVGVCAAITPWNFPA AMITRKVAPALAAGCAIVIKPAELTPLSAFALAELAHRAGVPAGVLQVVTGDARNIGGVLTASPIVRKLSFTGSTEVGRI LMAQSAPTIKRLSLELGGNAPFIVFDDADVDAAVEGAIVAKYRNGGQTCVCANRFYIQDGIYDAFAAKFAERTAQLRVGN GLEAGVVIGPLIEDAAIEKVNSLVEDATSKGGKVLAGGGKHPLGGTYYTPTVIGNATADMRMAREEIFGPVAPLFRFKQD DEAVAAANATEYGLAAYLYTRDISRAWRTAEALEYGMVGLNTGLISNEVAPFGGIKQSGVGREGSRHGIEEYLEIKYLCL QM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-134 | 64 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-83 | 44 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 9e-65 | 41 |
