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Name : gspE (Rmet_4711) Accession : YP_586842.1 Strain : Genome accession: NC_007974 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1353164 - 1354870 bp Length : 1707 bp Strand : - Note : - DNA sequence : ATGGACCCGATCGGCACGCATCCGGAGCAGCATGGGGGGACCACCCTCCGCGCAACGCTGCGCGAACTCGCGGCGTCCTA CGGGTCGGGCACCCGCGCGCTGGAAGCGTATATGTCCCAGAGCGGCGTGGGCGCGGACGAGAGCCTTGCCGAGCTGGCAA GCGCCTTCCGGATGGAGCCCATCGGCATTCGCGACCTGCAGGAGATGGAGCCAGACTTCGAGATCATTCCATTCGTCGAG GCCGTGGCACGCCTGTGTGTTTGCTTCCGGTCCGGGGACGGGCTCGTGTTCGTGATCGCGGACCCGCTCGATGCGCAGTC GCGCGGGCGGGTTGACCAGCGGATGCGTGCCCGGCCGCACGTGCGTTACGAATGGCGCCTGGCGACCGTCGGCGACGTGA CGGCCTATCTTGCGGCGCGTGAGAAAGACGTCCACGCGCTGGATACCGTTGCCTTCGAGGAACTGGAGCACCGCGCGGCG GAATCGTCCGCGCTGGCGCTGAGTCTGCAGGGCATCAGCAATGACGACAGCTCGGTCGTCAGGTTGCTCAATTCGACCAT CTATGACGCCTTGAAGATGCAGGCCAGCGATATCCATCTGGAATGCCGCGCTAACGGCCTGGTGATCAAGTGCCGCATCG ACGGCGTGCTGGCGGTGGTGGGCAGGGTCGACGGACGCGCACCCGCCGATCAGGTGCTGTCGCGTGTCAAGGTCATCTCG GAACTCGATATCGCCGAGCGGCGCGTGCCGCAGGATGGTCGCTTCAAGGCGCAGTATGCCGGGCGGGAGATCGACTTCCG CGTATCGATCATGCCGAACCTGTTCGGGGAGGACGCCGTCCTGCGCATTCTGGACCGCTACCAGCTATCGCAGTCCGCGC AGGGCCTGACGCTCGAAACACTGGGTTTTCAGGCTGCCGATACCGGTTTCATGCGGTCGGTGGCGTCAATGCCTTATGGC ATGTTGCTGGTGACCGGCCCAACCGGTAGCGGCAAGACCACGACGCTGTACGCCATCCTGACCGAGATAAACGATGGTCT GGACAAGATCGTGACCATCGAGGACCCGGTCGAGTACCAGCTCGGGGACATCCTGCAGATCCCGGTCAACGAGGCCAAGG GCCTGACCTTCGCGCGTGGCCTGCGCTCCATCCTGCGTCATGACCCGGACAAGATCATGGTGGGCGAGATCCGCGATGCG GAGACCGCGCAGATCGCGGTGCAGGCGGCGCTGACCGGACACCAGGTGTTCACGACCGTCCACGCGAACAACGTGTTCGA CGTGATCGGTCGTTTCACGAACATGGGGGTGGATCCATACAGCTTCGTCTCGGCGCTGAATGGCGTGGTCGCCCAACGGC TGGTGCGCAAGTGTTGCGATGGCTGCGTGGTCGAGGAAGCCGGTGATCGGGACTTGCTGGCACGATCTGGCATCGACCCG GACATGGCGGACGGGTTCCGCTTCCGGCGCGGACTGGGTTGCGCGGCCTGCCGTGGCAGTGGCTATCGTGGCCGGCGCGC GATTGCGGAAGCGCTGCGGATGAACGACGAACTCCGGGCGCTGCTCTCGGAGCGCGCGCCACTTGCGCGCATCAAGAGCG TGGCACTGCGGCAAGGTATGCAAACGCTGCGCAAGGCCGCGATCGAGATGGCGGCCGCAGGGGAAACAACGCTCGAGGAG ATCAATCGTGTCACGATCTCCGAGTAA Protein sequence : MDPIGTHPEQHGGTTLRATLRELAASYGSGTRALEAYMSQSGVGADESLAELASAFRMEPIGIRDLQEMEPDFEIIPFVE AVARLCVCFRSGDGLVFVIADPLDAQSRGRVDQRMRARPHVRYEWRLATVGDVTAYLAAREKDVHALDTVAFEELEHRAA ESSALALSLQGISNDDSSVVRLLNSTIYDALKMQASDIHLECRANGLVIKCRIDGVLAVVGRVDGRAPADQVLSRVKVIS ELDIAERRVPQDGRFKAQYAGREIDFRVSIMPNLFGEDAVLRILDRYQLSQSAQGLTLETLGFQAADTGFMRSVASMPYG MLLVTGPTGSGKTTTLYAILTEINDGLDKIVTIEDPVEYQLGDILQIPVNEAKGLTFARGLRSILRHDPDKIMVGEIRDA ETAQIAVQAALTGHQVFTTVHANNVFDVIGRFTNMGVDPYSFVSALNGVVAQRLVRKCCDGCVVEEAGDRDLLARSGIDP DMADGFRFRRGLGCAACRGSGYRGRRAIAEALRMNDELRALLSERAPLARIKSVALRQGMQTLRKAAIEMAAAGETTLEE INRVTISE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-72 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-72 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_586842.1 | type II secretion system protein E | VFG0182 | Protein | 9e-70 | 45 |
