Gene Information

Name : tnpR (Rmet_4473)
Accession : YP_586607.1
Strain :
Genome accession: NC_007974
Putative virulence/resistance : Virulence
Product : serine-based site-specific recombinase activity TnpR (resolvase) Tn6050
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1071617 - 1072177 bp
Length : 561 bp
Strand : +
Note : -

DNA sequence :
TTGCACGGTCAGCGCATCGGTTACGTCCGCGTCAGCAGCTTCGACCAGAACCCAGAACGGCAGCTCGAACAGATCCAGGT
GGATAAAGTGTTCACCGACAAGGCGTCGGGCAAGGACACACGGCGGCCCGAACTGGAACGGCTGCTCGCCTTCGTGCGCG
AAGGCGACACGGTCGTGGTGCACAGCATGGATCGTCTGGCGCGCAACCTCGACGACCTGCGCCGCCTGGTGCAGGGCCTC
ACCCAGCGCGGCGTACGCATCGAGTTCCTTAAGGAGCATTTGACCTTCACCGGCGAGGACTCGCCGATGGCGAACCTGAT
GCTGTCGGTAATGGGCGCGTTCGCCGAGTTCGAACGCGCCTTGATCCGCGAGCGGCAGCGCGAGGGCATCGCGCTCGCCA
AGCAGCGCGGGGCCTACCGTGGCAGGAAGAAATCCCTGTCGTCTGAGCGTATTGCCGAACTGCGCCAACGTGTCGAGGCT
GGCGAGCAAAAGACCAAGCTGGCTCGTGAATTCGGAATCAGTCGCGAAACCCTGTATCAATACTTGAGAACGGATCAGTA
A

Protein sequence :
MHGQRIGYVRVSSFDQNPERQLEQIQVDKVFTDKASGKDTRRPELERLLAFVREGDTVVVHSMDRLARNLDDLRRLVQGL
TQRGVRIEFLKEHLTFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEA
GEQKTKLAREFGISRETLYQYLRTDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 1e-68 89
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 9e-69 89
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 9e-69 89
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 2e-66 88
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 7e-66 86
res YP_005124341.1 DNA-invertase Not tested Not named Protein 2e-25 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpR YP_586607.1 serine-based site-specific recombinase activity TnpR (resolvase) Tn6050 VFG1030 Protein 4e-69 89