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Name : kdsB (Rmet_0533) Accession : YP_582688.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 568475 - 569284 bp Length : 810 bp Strand : - Note : - DNA sequence : ATGAGCATCCCGACCTTTACCGTTGTCATCCCTGCCCGCCTCGCCTCCACGCGGCTGCCAAACAAGCCGCTGGCCGACAT CGGCGGCCATCCGATGATCGTGCGCGTGGCTGAACGCGCCCACGCGTCGTCGGCCCAGCGCACCGTGGTGGCAACGGACT CCCAGGAAGTTGCGCAGGCCTGCGCCGCGCATGGCGTCGAAGCCGTGCTCACGCGTGCCGACCATCAGTCCGGCACCGAC CGGCTGTCGGAAGTGGCGGCACAGCTCGGGCTGGCCGATGACGCGATCGTCGTCAACGTACAGGGCGACGAGCCGCTGAT CGAGCCGACGCTGATCGACGAAGTCGCGCTGCATCTGGCGGCTCACACTGACTGCGCGATCGCCACGGCAGCGCATCCGC TGGACGACGTGGCCGAAGTATTCAACCCGAACGTGGTGAAAGTGGTCTGCGACAACGCGGGCCGCGCGCTCTATTTCTCG CGCGCGCCGATTCCGTGGGCACGCGATGCCTGGTCTGCCGTGCCGGCCCAGCCCGCGGCCACCGCGCAAGTCCCGCTGCC GGCCATGCCGGTGCTGCGTCACATCGGCATCTATGCCTATCGCGCGGGCTTCCTGCGCCGCTTCCCGACGTTGGCGGTCG CGCCGGTCGAACAGACCGAAGCGCTCGAGCAACTGCGTGCCATGTGGCATGGCGAGCGGATCGGCGTCATGGTGACGGCG GCTGCACCGGCGCCGGGCGTGGACACACCGGCGGACCTGGAACGCGTGCGTGCGCTATGGGTGCAGGGCATGGCTCAGGA AGGGCCGTGA Protein sequence : MSIPTFTVVIPARLASTRLPNKPLADIGGHPMIVRVAERAHASSAQRTVVATDSQEVAQACAAHGVEAVLTRADHQSGTD RLSEVAAQLGLADDAIVVNVQGDEPLIEPTLIDEVALHLAAHTDCAIATAAHPLDDVAEVFNPNVVKVVCDNAGRALYFS RAPIPWARDAWSAVPAQPAATAQVPLPAMPVLRHIGIYAYRAGFLRRFPTLAVAPVEQTEALEQLRAMWHGERIGVMVTA AAPAPGVDTPADLERVRALWVQGMAQEGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-33 | 44 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-33 | 44 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-33 | 43 |
