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Name : tnpA (Rmet_0480) Accession : YP_582635.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : transposase IS1090 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 508286 - 509536 bp Length : 1251 bp Strand : - Note : - DNA sequence : ATGCCTCGCAAACCGAAAGCCCCGCTGGCAGAGCTGCCGGCGATCCCCGCCGAGCTGCTTGAGCAGTTCGGCAATGGCCC GATGACGGCCGAAGCCATCCATGCCGCGACCCTGGCACTCAAGAAAGCGCTGATCGAGCGAGCCCTGGGCGGCGAGATGA ATCATCATCTCGGCTATTCACCGGGCGCAGCCAAACCAGCCGCCGTCACCAACCAGCGCAACGGTAAAGGTGCGAAGACG GTTCTGACCGAAGATGGCCCAATCCGAATCGAGGTGCCTCGCGACCGTGACGGCAGCTTCGAGCCGTTGCTGATTCCAAA GCACGAACGGCGCTTCACGGGCTTCGATGACAAGATCGTCGCCATGTACGCTCGGGGCATGACCGTGCGCGAGATTCAGG GTTTCCTGCAGGAGCAATACGGCACCGAGGTCTCGCCCGATTTCATCAGTTCGGTTACCGACGAGGTCATGGCCGAAGTC ACCGCCTGGCAAGCCAGGCCGCTTGAGCAGATGTATCCGGTCGTGTTCTTCGACGCACTGCGAGTGAAGATCCGTGAGGA TGCCGTCGTACGCAACAAGGCGGTCTATCTGGCGCTGGGCGTTCTGCCCGACGGCACGCGCGAGATTCTGGGGCTGTGGA TCGAGAACACCGAAGGCGCCAAGTTCTGGATGAAGGTTTTCAACGATCTCAAGACGCGCGGCGTCAACGACATTCTGATC GCAGTGACCGACGGCCTCAAGGGCATGCCGGAGGCGCTGAGCGCAGTATTCCCGGCGACCACGCTGCAAACCTGCATCGT CCATCTGATCCGCAACAGCCTGAATTACGCTAGCTGGAAAGATCGCAAAGCGCTAGCCGCCGCGATCCGGCCGATCTACA CCGCGCCGAGTGCGGAAGCCGCCGAAGCTGAGCTCAATACGTTTGCCGCGGGACCATGGGGGCAGAAATTCCCGACGGTC AGCGCTTCATGGCGTAACGCCTGGGACCGCGTGATCCCGTTCTTCGCATTTCCGCCGGCGGTGCGCAGGGTGATCTACAC GACAAATGCCATAGAAAATATCAATTCGCAGCTACGCAAGATCATCAAGACCCGAGGCCACTTCCCGAGCGACGAGGCAG CGACTAAGCTTATCTGGCTGGCGCTACGCAATATCACCTCTGACTGGGGTCGTGCCGCAAAAGATTGGAAGGACGCAATG AACCAATTTGCTATCCTCTACCAGGATCGATTCGTTCGACCATCCGTGTGA Protein sequence : MPRKPKAPLAELPAIPAELLEQFGNGPMTAEAIHAATLALKKALIERALGGEMNHHLGYSPGAAKPAAVTNQRNGKGAKT VLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFTGFDDKIVAMYARGMTVREIQGFLQEQYGTEVSPDFISSVTDEVMAEV TAWQARPLEQMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTREILGLWIENTEGAKFWMKVFNDLKTRGVNDILI AVTDGLKGMPEALSAVFPATTLQTCIVHLIRNSLNYASWKDRKALAAAIRPIYTAPSAEAAEAELNTFAAGPWGQKFPTV SASWRNAWDRVIPFFAFPPAVRRVIYTTNAIENINSQLRKIIKTRGHFPSDEAATKLIWLALRNITSDWGRAAKDWKDAM NQFAILYQDRFVRPSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 7e-90 | 47 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 9e-89 | 46 |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 9e-98 | 45 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 6e-85 | 44 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 2e-83 | 43 |
