|
Name : kdpB (Rmet_0039) Accession : YP_582194.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : potassium translocating ATPase, subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 41393 - 43624 bp Length : 2232 bp Strand : + Note : - DNA sequence : ATGCAACAACAATCCACCGCGACACGCTCCAGCGCTGCCGGCACGGCGTCGCGCAATCCGGCACCGGGTTCCACGGTGAT GACAGGCGGCGGCCTGCCAGGCCATCCGCGTCCCTCGCGCGGCATGATGTCGCCCGAGCTGGTGAAGCCGGCCATCATCG ATGCCTTCCGCAAGCTGAATCCACGCGATCAGTTGCGCAACCCGGTGATGTTCGTGGTCTACGCCGGCAGCATCCTGACG TCGATCCTGTGCGTGCGTGCCTGGCTGCACCCGACGCCGGGTGGCGAATCGGCAGGCTTCATCCTGGCCGTGACGGTATG GCTCTGGTTCACGGTACTGTTTGCGAACTTCGCCGAAGCACTGGCTGAAGGTCGCAGCAAGCAGCAGGCCGCTGCGCTGC GCGGACTCAAGACCACCACCATGGCACGCGTGGTGCGCGCCGGCCATCGCGATGCGCGCGCGCAGGGGGCTACCGAGCAG CGTGCGGCCACGGAACTGCGCAAGGGCGATGTCGTGCTCGTCGAGGCCGGCGACATGATCCCTGGCGATGGCGAAGTCAT CGAGGGCGTGGCGTCGGACGATGAAAGCGCCATCACCGGCGAATCGGCGCCGGTGATCCGTGAGTCGGGTGGCGACTTCT CATCGGTCACTGGTGGCACGCGTGTGCTGTCGGACTGGATCATCGTGCGCATCACGGCCAACCCCGGCGAGAGCTTCATC GACCGCATGATCAGCATGGTCGAAGGTGCCAAGCGCCAGAAGACACCGAACGAACTCGCGCTGACGATCCTGCTGGTGGG GCTCACGCTGGTGCTGTTGCTGGCCACAGCCACGCTGCAGCCGTATTCGCTCTACGCGGTGCTGGTGACCAAGGCCGGCG TGCCGGTCTCGGTGACGGTGCTCGTGGCGCTGCTGGTCTGCCTGATTCCGACCACGATCGGTGGCCTGCTGTCGGCGATC GGCGTAGCCGGCATGAGCCGCATGATGGAAGCGAATGTGATCGCCACGTCGGGCCGCGCGGTGGAAGCGGCGGGCGATGT CGACGTGCTGCTGCTCGACAAGACCGGCACGATCACACATGGCAATCGCCAGGCCTCGCGCTTTATCTGTGCGCCCGGCG TTACCGAGCGTCAGCTCGCCGAGGCCGCGTGGCTGTCGTCGCTGGCCGATGAAACACCGGAAGGCCGCAGCATCGTTGTG CTGGCACGCCAGCAGTCAGACGTGAGCGCGCCGGAGATGGGCGAGCGGGGACTGGCAGCGCCGGTGTTCGTGCCGTTCAC CGCGCAGACGCGCATGAGCGGTGTCGACGTGGCCAATGGCCAGATCGTGCGCAGCGTGCGCAAGGGCGCGGCCGATGCGG TGCGCCGCTACGTGACCGAGCGCGCGGGCAAGTTCCCCGATGTGGTGATGCAGGCCGTCGATGATGTGGCGCGCGCGGGC AGCACGCCGCTGGTGGTGGCGGAATCCATCGCGCAGGGTACCGAGGAATCGGTGCGAGTGCTCGGCGTGATCGAGCTCAA GGACATCGTCAAGGCCGGCATCCGCGAGCGCTTTGTCGAACTGCGCAAGATGGGTATCCGCACGGTGATGATCACCGGCG ACAACCGGTTGACCGCTGCGTCGATCGCGGCCGAGGCCGGTGTCGACGACTTCCTCGCCGAGGCCACGCCAGAGGCCAAG CTGGCGCTGATTCGCGAGTACCAGAGCGAAGGGCGTCTTGTGGCGATGACCGGCGACGGTACCAACGATGCACCGGCGCT GGCGCAGGCCGATGTGGCCGTGGCGATGAACAGCGGCACGCAGGCCGCGCGCGAGGCCGGCAATATGGTCGACCTGGACA GCAATCCAACCAAGCTGATCGAGATCGTAGAGATCGGCAAGCAGATGCTGATGACGCGCGGGTCGTTGACCACGTTCAGC GTGGCCAACGACGTGGCCAAGTATTTCGCCATCATCCCGGCCGCGTTCGCGACCACCTATCCGCAGCTCAACCTGCTCAA CGTGATGGGGCTGTCGACACCGGGCTCGGCCATCATGTCCGCCGTGATCTTCAATGCGCTCATCATCGTCGCGCTGATTC CGCTGGCGTTGCGCGGCGTGGTGTACCGCCCGCTGGGCGCGGCGGTGCTGCTGCGCCGCAACCTGCTGATCTATGGCCTG GGTGGCATCGTGGTGCCGTTCGTCGGGATCAAGCTGATCGACATGTTGCTGACGATGTTCGGCTGGGTCTGA Protein sequence : MQQQSTATRSSAAGTASRNPAPGSTVMTGGGLPGHPRPSRGMMSPELVKPAIIDAFRKLNPRDQLRNPVMFVVYAGSILT SILCVRAWLHPTPGGESAGFILAVTVWLWFTVLFANFAEALAEGRSKQQAAALRGLKTTTMARVVRAGHRDARAQGATEQ RAATELRKGDVVLVEAGDMIPGDGEVIEGVASDDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIIVRITANPGESFI DRMISMVEGAKRQKTPNELALTILLVGLTLVLLLATATLQPYSLYAVLVTKAGVPVSVTVLVALLVCLIPTTIGGLLSAI GVAGMSRMMEANVIATSGRAVEAAGDVDVLLLDKTGTITHGNRQASRFICAPGVTERQLAEAAWLSSLADETPEGRSIVV LARQQSDVSAPEMGERGLAAPVFVPFTAQTRMSGVDVANGQIVRSVRKGAADAVRRYVTERAGKFPDVVMQAVDDVARAG STPLVVAESIAQGTEESVRVLGVIELKDIVKAGIRERFVELRKMGIRTVMITGDNRLTAASIAAEAGVDDFLAEATPEAK LALIREYQSEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAREAGNMVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFS VANDVAKYFAIIPAAFATTYPQLNLLNVMGLSTPGSAIMSAVIFNALIIVALIPLALRGVVYRPLGAAVLLRRNLLIYGL GGIVVPFVGIKLIDMLLTMFGWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-164 | 58 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-164 | 58 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-135 | 53 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-135 | 53 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-135 | 53 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 7e-136 | 53 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 5e-135 | 53 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-135 | 53 |
