Gene Information

Name : cupR (Rmet_3523)
Accession : YP_585664.1
Strain : Cupriavidus metallidurans CH34
Genome accession: NC_007973
Putative virulence/resistance : Resistance
Product : DNA-binding transcriptional activator of copper-responsive regulon genes
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 3815131 - 3815550 bp
Length : 420 bp
Strand : -
Note : -

DNA sequence :
ATGAACATCGGAGAAGCCGCGGAAGCCTCGGGCGTTTCCGCAAAGATGATTCGCCACTACGAGTCGATCGGACTGGTCGA
TGCGCCGCCGCGCAGCGAGGGCGGGTATCGGCGGTATGACGAACGCGCGGTGCACACCTTGCGCTTCGTGCGACGGGCCC
GTAATCTCGGATTCTCGCTCGACGAGATTCGCGGTCTGTTGTCGCTCTGGCATGACCGGGCGCGCGCCAGCGCGGATGTG
AAGGCGCTGACGCTCAAGCACGTGGCCGACCTGGAGGTCCGCATCGCCGAACTCGCTGCGATGCGCGACACACTGCGGTC
GCTGGCCGAAGCGTGCACGGGGGATGACCGGCCCGACTGCCCGATCCTGTCGGATATGGCCCGTGCCGACAGCGAGGATC
GCCCGGCCTGCCATCACTAA

Protein sequence :
MNIGEAAEASGVSAKMIRHYESIGLVDAPPRSEGGYRRYDERAVHTLRFVRRARNLGFSLDEIRGLLSLWHDRARASADV
KALTLKHVADLEVRIAELAAMRDTLRSLAEACTGDDRPDCPILSDMARADSEDRPACHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 7e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cupR YP_585664.1 DNA-binding transcriptional activator of copper-responsive regulon genes BAC0190 Protein 5e-40 55
cupR YP_585664.1 DNA-binding transcriptional activator of copper-responsive regulon genes BAC0182 Protein 2e-34 52
cupR YP_585664.1 DNA-binding transcriptional activator of copper-responsive regulon genes BAC0569 Protein 2e-30 51
cupR YP_585664.1 DNA-binding transcriptional activator of copper-responsive regulon genes BAC0105 Protein 1e-27 47