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Name : gspE (Rmet_3393) Accession : YP_585534.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Virulence Product : general secretory pathway component, cryptic Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3667736 - 3669277 bp Length : 1542 bp Strand : + Note : - DNA sequence : ATGGCAACCGATACGCCAGTGACGGCACCCGCCGCGACAGAAACGCCACTCGAAGCCCCGTCGCCGATGGCGGCGCGGCT GGTCTCGTACACGTTCTCGCGCGAAGCACCGCTGCTGATCGCGCACCAACGCCCCGACGGACTCGAAGTCTGGGTCAGCC GCAAGACCTCTCCGGCCGCGCTGGCCGAGGTGGCGCGCGTGCACGGCGCGTTGCATCTGCGCGTGCTGGAACAGGCCGAA CTCGAGGCGGCGATGTCCGACGCCTATAACCGCCAGGACGGCACCGCCGCGCAGGTGGTGGGCGAGGTGGAAGGCGAAGT CGATCTGTCGCGCCTGATGCAGGACATCCCGGCCGTGGAAGACCTGCTCGAGTCCGAGGACGATGCGCCAATCATCCGCA TGATCAATGCGCTGCTGACGCAGGCCGCGCGCGAGCAGGCTTCCGATATCCACATCGAGCCGTTCGAATCGGCATCGGTC GTGCGTTTCCGTGTGGATGGCACGCTGCGCGACGTGGTGCGTCCGAAGAAGGCGCTGCATGGTGCCCTGATCTCGCGGAT CAAGATCATGGCGCAGCTCGACATTGCCGAGAAACGGTTGCCGCAGGATGGCCGCATCACGCTACGCGTGGGCGGACGGC CGGTGGACGTGCGCGTATCCACGCTGCCGACCGGACACGGCGAGCGCGCGGTGCTGCGTCTGCTCGACAAGGAAGCGGGC CGTCTCGATCTGGCCAAGCTCGGCATGGCGCGCTCGACGCTGGGCAGCTTCGATGATCTGATTCGCCAGCCACACGGCAT CGTGCTGGTGACCGGACCCACGGGCTCGGGCAAGACCACGACGTTGTACGCGGCGCTATCGCGGCTGGACTCCCATACGA CCAACATCATGACCGTCGAGGACCCGATCGAATACGATCTCGACGGCATCGGACAGACGCAGGTCAACGCGCGCATCGAC ATGACCTTCGCGAAGGCCCTGCGCGCGATTCTGCGTCAGGACCCGGACGTGGTCATGATCGGCGAAATCCGCGACCTCGA AACCGCGCAGATCGCGGTGCAGGCTTCGCTGACCGGCCACCTCGTGCTGGCCACGCTGCACACCAACGATTCAGCCTCAG CCGTAACTCGGCTGGTCGACATGGGCATCGAGCCGTTCCTGCTTTCCTCGTCGCTGATCGGCGTGCTGGCGCAGCGGCTG GTGCGCCGTCTCTGCCCGCACTGCAAGCGCGAGGAAGTCATCGAAGTCACACCGGGCGAATCCGAGACGCTTCTTGCCGA CGGCAAGCCACTGCAGCGCGTATGGCACCCGGTTGGTTGCGACAAGTGCGGAAATTCCGGCTATCAAGGCCGTATGGGTG TGTATGAACTGCTGACTGTCGATGCCGAAATCCAGACGATGATCCACCGCCAGCAGCCCGAGTCCGAGATCAAGCAACGG GCGCTGGCCAAGGGCATGCACACGATGCGCGGTGATGCGCAGCGCTGGATCGACAGCGGCGCCACTTCGCTTGAAGAAGT GCTGCGCGTGTCGCGCGACTAG Protein sequence : MATDTPVTAPAATETPLEAPSPMAARLVSYTFSREAPLLIAHQRPDGLEVWVSRKTSPAALAEVARVHGALHLRVLEQAE LEAAMSDAYNRQDGTAAQVVGEVEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFESASV VRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAG RLDLAKLGMARSTLGSFDDLIRQPHGIVLVTGPTGSGKTTTLYAALSRLDSHTTNIMTVEDPIEYDLDGIGQTQVNARID MTFAKALRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSASAVTRLVDMGIEPFLLSSSLIGVLAQRL VRRLCPHCKREEVIEVTPGESETLLADGKPLQRVWHPVGCDKCGNSGYQGRMGVYELLTVDAEIQTMIHRQQPESEIKQR ALAKGMHTMRGDAQRWIDSGATSLEEVLRVSRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-116 | 52 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-116 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_585534.1 | general secretory pathway component, cryptic | VFG0182 | Protein | 1e-126 | 56 |
| gspE | YP_585534.1 | general secretory pathway component, cryptic | VFG1876 | Protein | 3e-122 | 52 |
| gspE | YP_585534.1 | general secretory pathway component, cryptic | VFG2048 | Protein | 4e-117 | 52 |
| gspE | YP_585534.1 | general secretory pathway component, cryptic | VFG2426 | Protein | 5e-78 | 46 |
| gspE | YP_585534.1 | general secretory pathway component, cryptic | VFG0112 | Protein | 1e-86 | 45 |
