Gene Information

Name : gspG (Rmet_3384)
Accession : YP_585525.1
Strain : Cupriavidus metallidurans CH34
Genome accession: NC_007973
Putative virulence/resistance : Virulence
Product : pseudopilin, cryptic, general secretion pathway
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3659107 - 3659571 bp
Length : 465 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCAGATTCGCCAGCCAGCCCGACACCCGACTCCCCAGCCAACGCCGCCGCGCGCGCGGCTTCACCCTGATCGAAAT
CATGGTGGTGATCGTGATCCTGGGGGTGCTCGCGGCCCTGGTGGTGCCGAAAATCATGAGCCGCCCCGATGAGGCACGCA
TCGTCGCGGCGCGTCAGGACATCTCGTCGGTCATGCAGGCGCTGAAGCTTTACCGTCTCGACAACGGCCGCTACCCGACC
ACCGAACAGGGTCTGGCGGCGCTGGTGACCAAGCCGACCATCGAGCCCGTTCCCAACAACTGGAAGGGTGGTGGTTACCT
GGAAAAGCTGCCGAAGGACCCGTGGGGTCACCCGTACCAGTACCTGAACCCCGGCGTACGCGGTGAGATCGACGTGTTCA
GCTTCGGTGCCGATGGCCAGCCCGGCGGCACCGGCAACGACGCCGACATCGGCAACTGGGAATAA

Protein sequence : 
MRRFASQPDTRLPSQRRRARGFTLIEIMVVIVILGVLAALVVPKIMSRPDEARIVAARQDISSVMQALKLYRLDNGRYPT
TEQGLAALVTKPTIEPVPNNWKGGGYLEKLPKDPWGHPYQYLNPGVRGEIDVFSFGADGQPGGTGNDADIGNWE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-25 54
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-25 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_585525.1 pseudopilin, cryptic, general secretion pathway VFG1871 Protein 7e-35 66
gspG YP_585525.1 pseudopilin, cryptic, general secretion pathway VFG0180 Protein 2e-33 64
gspG YP_585525.1 pseudopilin, cryptic, general secretion pathway VFG2050 Protein 7e-26 54