Gene Information

Name : pehR (Rmet_3090)
Accession : YP_585231.1
Strain : Cupriavidus metallidurans CH34
Genome accession: NC_007973
Putative virulence/resistance : Virulence
Product : Polygalacturonase histidine response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 3347564 - 3349246 bp
Length : 1683 bp
Strand : -
Note : -

DNA sequence : 
ATGCCTCCCAGATTGTCCGCACCCGATCCGATTCTCGTCATCGACGACGAGGCCGACCTGCGCGAGCTGCTGGATATCTC
GCTGCGACGCATGGGGCATGACGTGGTGATGGCCGGTTCGCTGGCCGAGGCCCGCCTGCGTCTGGCCGAGCGGCGCTACA
GCCTGGTGCTGACCGACATGCGGCTCGGCGATGGCCTCGGCATCGAGATCGTGCGCCAGTTGTCGGCGTCGCCCGAGCGC
ACCCCGGTGGCCGTGATCACGGCGTATGGCAGCGCGGACAACGCGGTGGATGCGCTCAAGGCCGGCGCGTTCGACTACAT
CGCCAAGCCGGTATCTCTCGAGCAACTCCGCACGCTGATTCTCAACGCACTGGGCCGTCACCAGCGCGGTGCGAACGGTA
ACGACACATCCGATCAGGCCGATGCGGGGGACGCGTCCGACGCGACCGATGGGGCCAGTCTGGGCGATCGCGCGGCCGGG
CTGCTACCGGGGGTCTCGCCGGCAATTCACGAGGTACGGCGCTCGCTGCCGCGCCTGGCGCGCAGCATGGCACCGGTGGT
GATCAGCGGCGAATCCGGCAGCGGCAAGGAACGGGCGGCGCGAGCGATTCACGCGATCAGCGCGCGCTCGGCGCATCCAT
TTGTGGCCGTGAACTGCGGCGCGATCCCTGAGACGCTGATGGAGGCCGAGTTCTTCGGTCACGTCAAAGGCGCCTTTACT
GGGGCCGACGCCGAGCGCGGCGGGTTCTTCCAGGCCGCCAATGGCGGCACGCTGCTGCTCGATGAGGTCGCGGACTTGCC
GCTGGCGATGCAGGTGAAGCTGCTGCGCGCGTTGCAGGAACGCCGCGTGCGCAAGATCGGCGCTAGCAAGGAAGACAGCG
TGGATGTGCGCGTCATGTGCGCCAGCCACAAGGATCTGGCGGCGATGGTCGCCGCCGGAGCATTCCGGCAGGACTTGTAC
TACCGCCTCAACGTGCTTGAACTCCGGATGCCCACGATGCGCGAGCGCGCCGAGGACATCCCGGTGCTTGCCCGCGCGAT
TCTCGAGCATCTGGCCGTGCGCTACGGCGATGCGCATCCCAAGCGGCTGTCGCGCGCGGCGCTGGAATGGCTCTGCGCGT
ACGAATTTCCGGGGAACGTGCGCGAGCTCGAGAACCTGCTCGAGCGTGCCTACGCGTTCGCTGAGAGCGAGGAGATCGAG
GTGGCCGACCTGGGGCCGCTCGACACCGGCATCGAGCGTGCCGCGCTGATGCAGACGGCCATGGCGGCGCCGCCGTTGAC
TGCCGTGCCGCCGGCAGCCATGTATCACCGGTGGGGTAACGCCGGAGCCTGGGGCGTGCCCGCTCCGGCGACACCCGTGG
CGGTGATGCCAGAACCGGCGCCCGTGCCGGCCCCGATTCCCGTGGCAGGGCCGGTCGCCGTGCCTGCCCCCGATGCTGGC
GCGCCGGCTGCCACCACGTTCCCAATTAATCTTCCCGCGCACCTGGAGGCGATGGAGCGCGAGCTGATCCTGCGCGCCTT
GCGGCAGACCGGCTTCAACCGGACCGCCGCGGCGCCGCTGCTGGGTTTGAACTTCCGCCAGTTGCGGTATCGGATCGAAC
AGCTCGGTATCTGCGAGGAGGATGGGCGCAGCGGCCGGGACGATAGCGAATCGCTGGCCGAAGGGGAGGGGCGCGATGTC
TGA

Protein sequence : 
MPPRLSAPDPILVIDDEADLRELLDISLRRMGHDVVMAGSLAEARLRLAERRYSLVLTDMRLGDGLGIEIVRQLSASPER
TPVAVITAYGSADNAVDALKAGAFDYIAKPVSLEQLRTLILNALGRHQRGANGNDTSDQADAGDASDATDGASLGDRAAG
LLPGVSPAIHEVRRSLPRLARSMAPVVISGESGSGKERAARAIHAISARSAHPFVAVNCGAIPETLMEAEFFGHVKGAFT
GADAERGGFFQAANGGTLLLDEVADLPLAMQVKLLRALQERRVRKIGASKEDSVDVRVMCASHKDLAAMVAAGAFRQDLY
YRLNVLELRMPTMRERAEDIPVLARAILEHLAVRYGDAHPKRLSRAALEWLCAYEFPGNVRELENLLERAYAFAESEEIE
VADLGPLDTGIERAALMQTAMAAPPLTAVPPAAMYHRWGNAGAWGVPAPATPVAVMPEPAPVPAPIPVAGPVAVPAPDAG
APAATTFPINLPAHLEAMERELILRALRQTGFNRTAAAPLLGLNFRQLRYRIEQLGICEEDGRSGRDDSESLAEGEGRDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-70 43
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-70 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pehR YP_585231.1 Polygalacturonase histidine response regulator BAC0467 Protein 1e-58 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pehR YP_585231.1 Polygalacturonase histidine response regulator VFG1214 Protein 2e-83 55