Gene Information

Name : tpx (Rmet_3068)
Accession : YP_585209.1
Strain : Cupriavidus metallidurans CH34
Genome accession: NC_007973
Putative virulence/resistance : Virulence
Product : lipid hydroperoxide peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 3325537 - 3326037 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAATGTGACCCTCGGCGGTAACGCCATTGAAGTTGGCGGCAAGTTTCCTCATAGCGGCGACAAGGCGCCCGCATT
CTCGCTCGTCGGCAAGGATCTGAAGGATGTCTCGCTGGCCGACTTCGCAGGCAAGCGCAAGGTGCTGAACATCGTGCCGA
GCCTCGATACGCCCGTGTGCCAGGCATCTGCCCGCAAGTTCAACGAGGCCGCCGGCAACCTGAACAACACCGTCGTGCTG
ACGATCTCGGCCGACCTGCCGTTCGCGATGGGCCGCTTCTGCACCACCGAAGGCCTGGCCAACGTGGTGACGCTGTCGAC
GATGCGTGGCGCCGAGTTCAAGAACGCCTACGGCGTGGACATCAAGACCGGCCCGCTGGCCGGCGTGTGCGCTCGCGCCG
TGGTCGTGGTGGACGAGAACGACACGGTCAAGTACAGCGAACTGGTGTCCGAAATCAAGCAGGAACCGAACTACGACGCC
GCACTCGCCGCATTGAAGTAA

Protein sequence : 
MSNVTLGGNAIEVGGKFPHSGDKAPAFSLVGKDLKDVSLADFAGKRKVLNIVPSLDTPVCQASARKFNEAAGNLNNTVVL
TISADLPFAMGRFCTTEGLANVVTLSTMRGAEFKNAYGVDIKTGPLAGVCARAVVVVDENDTVKYSELVSEIKQEPNYDA
ALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-33 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-33 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-33 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-33 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_585209.1 lipid hydroperoxide peroxidase VFG0087 Protein 5e-34 48