Gene Information

Name : hmzR (Rmet_3016)
Accession : YP_585158.1
Strain : Cupriavidus metallidurans CH34
Genome accession: NC_007973
Putative virulence/resistance : Virulence
Product : Two component heavy metal response transcriptional DNA binding regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3274787 - 3275452 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCGTATTGATCGTGGAAGACTCGCAAACGCTGGCCGAAGCCCTGAGCCAGAGCCTTCAGTCGGAAGGCTATGCCTG
CGATACAGCAGCCGATGGCGTGTCCGCGCTGAAGTTTCTTGCCAGCTACCGGTACGACGCCATCATTCTGGACTTGATGC
TGCCCCGGCTGGACGGCTTTGGCGTGTTGCGCGCATTGGGCCGGGAGGCCCATGCCGCACCGGTGTTGGTGCTCTCCGCG
CGCGAACTGCTCGACGACCGGGTGCGGGCCTTGGATGCGGGTGCCGATGACTACCTGACAAAACCCTTCGAGCTAGCCGA
ACTGCTGGCTCGCCTGCGGGCGCTAGTACGGCGTCCGCCGCAACGGGACGTTCCAGTTCTGCGCCACGGCGATCTGGAGG
TCGATCCGCGCTCGCGCATCGCGAGGTTCAAGTGCATTGATCTTGGGCTCACGCCGAAGGAGTATGGACTGCTCGACTTG
CTGCTGCGTCGGCGCGGCGCCACGCTGTCGCGCTCGCAGATTTTTGAACATTTGTACGACAGCCGCAGCGATGCATCGGA
CAAAGTGGTAGAGGTGATCGTCAGCACCTTGCGAACCAAGCTTGCCCAGTGCGGCCTGGATGAACTGATCGTGACACGCC
GTGGCTTCGGCTACATCCTGCCCTGA

Protein sequence : 
MRVLIVEDSQTLAEALSQSLQSEGYACDTAADGVSALKFLASYRYDAIILDLMLPRLDGFGVLRALGREAHAAPVLVLSA
RELLDDRVRALDAGADDYLTKPFELAELLARLRALVRRPPQRDVPVLRHGDLEVDPRSRIARFKCIDLGLTPKEYGLLDL
LLRRRGATLSRSQIFEHLYDSRSDASDKVVEVIVSTLRTKLAQCGLDELIVTRRGFGYILP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hmzR YP_585158.1 Two component heavy metal response transcriptional DNA binding regulator, winged helix family BAC0197 Protein 7e-27 44
hmzR YP_585158.1 Two component heavy metal response transcriptional DNA binding regulator, winged helix family BAC0083 Protein 1e-22 43
hmzR YP_585158.1 Two component heavy metal response transcriptional DNA binding regulator, winged helix family BAC0308 Protein 7e-22 43
hmzR YP_585158.1 Two component heavy metal response transcriptional DNA binding regulator, winged helix family BAC0125 Protein 3e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hmzR YP_585158.1 Two component heavy metal response transcriptional DNA binding regulator, winged helix family VFG1390 Protein 8e-25 44
hmzR YP_585158.1 Two component heavy metal response transcriptional DNA binding regulator, winged helix family VFG1389 Protein 9e-22 42
hmzR YP_585158.1 Two component heavy metal response transcriptional DNA binding regulator, winged helix family VFG0596 Protein 6e-24 41