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Name : tniR (Rmet_3007) Accession : YP_585149.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : serine-based site-specific recombinase activity (resolvase) (Tn6048) Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 3263114 - 3263728 bp Length : 615 bp Strand : - Note : - DNA sequence : ATGCTGATTGGCTACATGCGGGTATCGAAAGCAGACGGCTCACAGGCCACCGACTTGCAGCGTGATGCACTGATCGCTGC CGGCGTCGATCCGGCCCATCTCTACGAGGATCAAGCGTCGGGCAAACGCGAGGATCGTCCCGGCCTGTTGAGCTGCCTGA AGGCGCTACGACCGGGGGATACGTTGATGGTGTGGAAACTTGACCGGCTCGGGCGCGATCTGCGGCATCTCATCAACACC GTGCATGACCTGACCGGGCGAGGCATCGGTCTGAAAGTGTTGACTGGGCACGGTGCAGCCATTGACACCACGACGGCCGC CGGCAAGTTGGTCTTCGGCATCTTCGCCGCGCTGGCCGAGTTCGAGCGCGAACTGATTACCGAGCGCACGATTGCAGGAT TGGCTTCGGCGAGGGCGCGCGGTAGGAAGGGCGGCCGGCCCTTCAAGATGACTGCCGCCAAGTTGCGGCTGGCGATGGCC GCTATGGGGCAGCCCGAAACCAAGGTCGGCGATCTATGTCAGGAACTGGGCATCACAAGACAGACCTTGTATCGGCACAT TTCGCCGAAGGGCGAGTTGCGCCTTGATGGCGAGAAACTGCTCAGTCAAATTTGA Protein sequence : MLIGYMRVSKADGSQATDLQRDALIAAGVDPAHLYEDQASGKREDRPGLLSCLKALRPGDTLMVWKLDRLGRDLRHLINT VHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAEFERELITERTIAGLASARARGRKGGRPFKMTAAKLRLAMA AMGQPETKVGDLCQELGITRQTLYRHISPKGELRLDGEKLLSQI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| 1_318 | CAJ77076.1 | Resolvase | Not tested | AbaR1 | Protein | 2e-57 | 70 |
| ABTW07_3871 | YP_005797119.1 | resolvase IS26 | Not tested | AbaR4e | Protein | 3e-57 | 70 |
| tnpR | ACN81015.1 | TnpR resolvase | Not tested | AbaR5 | Protein | 3e-57 | 70 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 2e-30 | 53 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 2e-30 | 53 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 2e-30 | 53 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 2e-30 | 53 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 2e-30 | 53 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 2e-30 | 53 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 2e-30 | 53 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 2e-30 | 53 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 2e-30 | 53 |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 7e-22 | 47 |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 8e-23 | 41 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 4e-23 | 41 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 4e-23 | 41 |
