Gene Information

Name : ribD (Rmet_2688)
Accession : YP_584830.1
Strain : Cupriavidus metallidurans CH34
Genome accession: NC_007973
Putative virulence/resistance : Unknown
Product : multifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 2919958 - 2921079 bp
Length : 1122 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTTCCGCCGCTGACTACACCGCCATGGAACAGGCCCTCGCGCTCGCCGCGCGTGGCATGTTCACCACCACGCCGAA
CCCTCGTGTCGGCTGCGTGCTGATGAAGGACGGGGTGGTCATCGGGGAAGGTTACACGCAACCGGCCGGCCAGGATCATG
CCGAGATCCAGGCCATGAAGGATGCGATCTCGCGCGGCCATGATCCCGCTGGCGCCACCGCCTACGTCACGCTGGAACCG
TGCAGCCACTTCGGCCGCACGCCACCATGTGCCGACGCGCTGGTACGCGCTGGTATCGCGCGCGTGGTGGCTGCCATGGA
AGATCCGAATCCCACCGTATCCGGCCGTGGCCTGCAGCGCTTGCGCGACGCGGGCATCGACGTCCGCTGCGGGCTGCTGG
AAAAGGAAGCGCGGGATCTCAATATCGGCTTTATCTCGCGCATGACGCGCGGACTTCCCTGGGTGCGCGTCAAGGTAGCT
GCATCCCTCGACGGCGGCACTGCGCTGCACGATGGTACGAGCCAGTGGATCACCGGCCAGCCCGCACGCGACGACGGGCA
CGCCTGGCGCGCCCGGGCCTGCGCCATCCTGACCGGTATCGGCACCGTCCGCGATGACAATCCGGCACTGACCGTGCGTG
CCATCCCGACGCCGCGGCAGCCGCAGCGCGTGCTTGTCGACTCACGGCTTGAAGTGCCGCTCGACGCGCAGATCCTCAAC
CGCGATACCGGCGACTTCGCCAAACCCGTGCTGGTCTTCTGTGCCATCGAAGACAAGGCCCGCCAGCGCGCGCTCGAGGC
ACGTGGCGTCGAAGTCGTGGTACTGCCCAATCCGCATGGCAAGGTGGAACTGCGCCGCATGCTGGAAGAACTCGCGCGGC
GAGGCATCAACGAACTCCACGTGGAAGCGGGTTTCAAGCTCAACGGCTCACTGATCCGCGAAGGCTGCGCGGACGAACTG
CTGGTCTACCTGGCGCCGAAGCTGCTTGGCGACGCGCAGGGCATGTTCAACCTGCCGCCGCTGTCGAAGCTTGAGGACGC
GACCGAATTCCGCTGGCACGAAGTGCGCCAGATTGGCGACGATTTGCGCCTGATCGCGCGCCGCGCCGACACCCAACACT
GA

Protein sequence : 
MFSAADYTAMEQALALAARGMFTTTPNPRVGCVLMKDGVVIGEGYTQPAGQDHAEIQAMKDAISRGHDPAGATAYVTLEP
CSHFGRTPPCADALVRAGIARVVAAMEDPNPTVSGRGLQRLRDAGIDVRCGLLEKEARDLNIGFISRMTRGLPWVRVKVA
ASLDGGTALHDGTSQWITGQPARDDGHAWRARACAILTGIGTVRDDNPALTVRAIPTPRQPQRVLVDSRLEVPLDAQILN
RDTGDFAKPVLVFCAIEDKARQRALEARGVEVVVLPNPHGKVELRRMLEELARRGINELHVEAGFKLNGSLIREGCADEL
LVYLAPKLLGDAQGMFNLPPLSKLEDATEFRWHEVRQIGDDLRLIARRADTQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-54 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-54 45