Gene Information

Name : Rmet_2350 (Rmet_2350)
Accession : YP_584496.1
Strain : Cupriavidus metallidurans CH34
Genome accession: NC_007973
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2561490 - 2562401 bp
Length : 912 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCATCCTGTACTCGCGCTGCTGGGGCTACTGGCCGTGGCCGCGGCACCCGTCGCCCAGGCGGTGGAGATCCTGCG
TTGGGAACGCATGCCACTGGCAGTGCCGCTGAAGGTCGGTCAGGAACGCATCGTGTTCATCGACCGGAACGTGCGCGTGG
GCGTGCCCGCGGGCGTGGGCGAACGCCTGCGCGTGCAGAGTGCGGGTGGCGCGGTGTACCTGCGCGCCAGCGAGCCGATC
GAGCCCACGCGGTTGCAACTGCAGGACGCCGACACGGGCGCGCTGATCCTGCTGGACATCGCAGCCGAACCGCCCAAGGA
CGGGGAAGCCGAGCTGGAGCCGGTGCGCATCGTCGAGGGTGACAGCGCACCGGGACGCTATGGCGAGCAGGCCGACAGTG
CCGAGGCCCCGGCACGCGCCCAGGGCCAGGCAGGTGCGCGGACCGCGCGGCGCGAAACTCCGGTCCCTGTCGTGCTGACG
CGCTTCGCCGCGCAGAACCTCTACGCACCGCTGCGCACCGTCGAGCCGCTTCCGGGCGTCATGCGGGTCAACCTGCCCCG
CGACCTCGACCTGGACACACTGATGCCAACGCTGCCGGTGCGCGCGGTCGCGCTCGCGTCGTGGCGCCTGGAAGACCAAT
GGGTGACTGCCGTGCGCCTTACCAACACCGGCGCCGACTGGGTCGCGCTCGACCCGCGCGTGCTGCAAGGCGATTTCCTC
ACCGCCACCTTCCAGCACGAGGCGCTGGGCCCGCGCGGCACGCCCGAGGACACGACCGTCCTCTACCTGGTCACGGGCGG
CCGCGGCCTCGCGCAGTCGCTGCTGCCGGCGATTCACCGCTTCGACCCTGCCGTGCATCTGCCGCAGCCGGACGGCGACG
AGAACGCCAAGGAGGCCCGCCATGCGCAGTAA

Protein sequence :
MKHPVLALLGLLAVAAAPVAQAVEILRWERMPLAVPLKVGQERIVFIDRNVRVGVPAGVGERLRVQSAGGAVYLRASEPI
EPTRLQLQDADTGALILLDIAAEPPKDGEAELEPVRIVEGDSAPGRYGEQADSAEAPARAQGQAGARTARRETPVPVVLT
RFAAQNLYAPLRTVEPLPGVMRVNLPRDLDLDTLMPTLPVRAVALASWRLEDQWVTAVRLTNTGADWVALDPRVLQGDFL
TATFQHEALGPRGTPEDTTVLYLVTGGRGLAQSLLPAIHRFDPAVHLPQPDGDENAKEARHAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-107 100
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-68 65
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-60 59
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 2e-59 58
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 8e-60 58
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 1e-62 56
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 4e-47 50
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 3e-46 50
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 2e-47 50
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 1e-45 49
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 5e-44 49
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 5e-44 49
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-43 44