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Name : Rmet_2330 (Rmet_2330) Accession : YP_584476.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : putative plasmid-related DNA/RNA helicase Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 2543456 - 2545735 bp Length : 2280 bp Strand : + Note : - DNA sequence : ATGTCCCTCGATCTCGAAACCACTGCCGCTGAATCCGCGCCCGTACAGGGCGAACTGCTCGACGCGGAATCTTCCCCTCT GACCCTGAGCCTTCAGGATTTTGTCGGCGAGTTCGGCGACGAACTACTCGACGCCCTCAACAGCGCTAATCCGCCGGTCT ATACCGGCCAACCGCAGGCGCACCGGCAACTGGTGGTCGCCAGCCTCAAGCGCAAGCTGTTCCCAGCCCAGGCCGAAGTC GTCCACGCCGCCGCCGAGCTGCTGATCGACCGTGGCGAACGTGCTGCGATCGTCAATGGCGAGATGGGCTGCGGCAAGAC GACCGTCGGCATTGCCACGGCCGCCGTGCTCAACGCCGAAGGCTATCGCCGCACTCTGGTGCTGTCGCCGCCCCACCTGG TTTACAAGTGGCGGCGCGAGATCCAGGAGACGGTGGCCGGTGCCAAGGTGTGGGTACTCAACGGGCCGGATACGCTCGTC AAGCTCATCAAGCTGCGCGAGCAGTTGGGCGTGCAGCCCACGGGCCAGGAGTTCTTCGTCCTGGGGCGCGTCAGGATGCG GATGGGCTTTCACTGGAAGCCTGTCTTCACCACGCGGCGCACCCGCCACGGCGACGTGGCGGCCTGCCCGGACTGCGGCA CGGTCATCACCGACCTCGACGGCGAGCCGGTCAACCCGATCGCGCTCCAAGCCGAGGAGTGCCGCAGGAAGTGCGGCCAC TGCGCCGCGCCCCTGTGGACACTGATCCGCCCGCGCAGTCTGTCCGGCAGCGACCAGTCCTCGGCCGTGCTCAAAGCCTT AAAGCGCATACCGACCATCGGAGAGGTCACCGCGCAGAAGCTGATGCAAAAGTTCGGTGACGGGTTCCTGGCGTCGATGC TCGGCGACAACATCCATGAGTTCATCAACCTCATGGATGGCAACGGCGAGCTGGTGTTTTCCGACCGTCAGGCCACGCGC ATGGAACGTGCGATGGCCAACATGGAGTTCGGCTTTGGCGAGGGCGGCTATCAGCCGTCCGAGTTCATCAAACGCTACCT GCCGCAAGGCACGTTCGACCTGCTCATCGCCGATGAGGCACATGAGTACAAGAACGGGGGCAGTGCCCAGGGCCAGGCCA TGGGCGTGCTGGCGGCGAAGGCTCGCAAGACCTTGCTGCTGACCGGCACGTTGATGGGCGGCTACGGGGACGACCTGTTC CACCTGCTGTTCCGAGCCCTTCCGGGGCGGATGATCGAAGACGGCTACCGCCCGACCACGAGCGGCAGCATGACCTCGGC TGCGATGGCGTTCATGCGCGATCACGGGGTGTTGAAGGACATCTACTCCGAGAGCACCGGCACGGCGCACAAGACGGCCA AGGGCACCAAGGTATCGGTGCGCACGGTCAAGGCCCCGGGGTTTGGCCCCAAGGGCGTGCTGCGCTGCATCCTGCCGTTC ACGATCTTTCTCAAGCTCAAGGACATCGGTGGCAACGTCCTGCCGCCGTATGACGAGGAGTTCCGTGAAGTCGCGATGGA CACGGCGCAAGCCGCGGCCTACCGCGATCTGGCGGGTCGGCTGACCGCGGAGCTGAAACAGGCTCTGGCGCGACGCGATA CGACCTTGCTGGGTGTGGTCCTCAACGTGCTGCTGGCCTGGCCGGATTGCTGCTTCCGGTCGGAGACCGTGGTGCATCCG CGCACGCGCAACACCTTGGCGTTTGTCCCGGCTCAGTTCAACGAGTTCGAGATCAGCCCCAAGGAGCGTGAGCTGATCGA CATCTGCAAAGAGGAGAAGGCGCAGGGCCGCAAGGTCCTGGCCTACACGGTCTATACCGGCACGCGCGACACCACGTCGC GCCTGAAGGTGTTGCTGGAGCAGGAAGGCTTCAAGGTGGCGGTGCTGCGCGCGAGCGTGGATGCCAGCCGCCGCGAAGAC TGGATCGCCGAGCAACTGGACCGTGGCATCGACGTGCTCATCACCAACCCCGAGTTGGTCAAGACGGGGCTGGACCTGTT GGAGTTCCCGACGATCGTGTTCATGCAGTCGGGCTACAACGTGTACTCGCTCCAGCAGGCGGCACGCCGCTCCTGGCGCA TCGGGCAGAAGCAGCCCGTGCGTGTGATCTACCTCGGCTACGCCGGTTCCTCGCAGATGACCTGCCTGGAGCTGATGGCC AAGAAGATCATGGTCTCGCAGTCCACCTCGGGCGACGTGCCCGAATCCGGGCTCGATGTCCTGAACCAGGACGGTGATTC CGTCGAGGTCGCACTGGCCCGGCAGCTTGTCGCCGCATGA Protein sequence : MSLDLETTAAESAPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYTGQPQAHRQLVVASLKRKLFPAQAEV VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV KLIKLREQLGVQPTGQEFFVLGRVRMRMGFHWKPVFTTRRTRHGDVAACPDCGTVITDLDGEPVNPIALQAEECRRKCGH CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQATR MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF HLLFRALPGRMIEDGYRPTTSGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP RTRNTLAFVPAQFNEFEISPKERELIDICKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFKVAVLRASVDASRRED WIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C71 | AAN62165.1 | conserved hypothetical plasmid protein | Not tested | PAGI-2(C) | Protein | 0.0 | 100 |
| ORF SG81 | AAN62302.1 | conserved hypothetical plasmid protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 88 |
| RL063 | AAP84188.1 | plasmid related protein | Not tested | PAPI-1 | Protein | 0.0 | 72 |
| unnamed | ABR13404.1 | putative helicase | Not tested | PAGI-5 | Protein | 0.0 | 72 |
| pph67 | CAI36108.1 | superfamily II DNA/RNA helicase | Not tested | PPHGI-1 | Protein | 0.0 | 70 |
| yea | AAW83099.1 | Yea | Not tested | GGI | Protein | 2e-176 | 50 |
