|
Name : yejF (Rmet_2143) Accession : YP_584291.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2334258 - 2335907 bp Length : 1650 bp Strand : - Note : - DNA sequence : ATGAGCACGGCCATGACCTTTACCGAACCGGCGGCAGTGCCAGCGCCGGGTACCAAGCTAATGTGCGTGGACCGCCTGTC GGTCACCTTCGGGGAGGGCGAGCACGCCACGCGCGCGGTGCGCGAAGTGAGTTTCGACCTTCGGGCCGGCGAGCGCTACG CGCTGGTCGGCGAATCGGGCTCGGGCAAGACCGTGACCGCGCTGGCGATGCTTCGACTGGTCGAGGATGCGCACTATCAG GGCTCGATCCGTTTCGAGGGCGAAGATCTGCTGCAGGTGTCCGATCGCGAGATGCGCCGCATTCGCGGGTCGGAAATCGC CATGATCTTCCAGGAGCCCATGACGGCGCTTAACCCGCTCTACACGATTGGTAACCAGATCGTGGAGACGCTGGCGCTGC ACGAAGGGCTGGACCGCCGGGCTGCCCGCGATCGCGCGATTGCGCTGCTCGAGCGCACCGGCATCACCGACGCGCCCAAC CGTTTCAATAGCTTCCCGCACCAGTTGTCGGGTGGCCAGCGTCAGCGCGCGATGATCGCCATGGCGCTCGCGTGCCGCCC CAAGCTGTTGCTGGCCGACGAGCCGACCACAGCGCTGGACGTGACCATCCGGGCCCAGATCCTGGATCTGTTGCGCGACC TGCAGGCCGAGTTCGGCATGGCGGTGATGCTGATCACGCACGATCTGAACATGGTCAGGGCGTTCGCCCAGCGCGTGGGC GTGATGGAAAAGGGCGTCCTGGTCGAGACGGGCGAGACCGCCGAGGTCTTCTCCAATCCGCACCATCCCTACACACGCAA GCTGATCGACAGTCGGCCCCGGCGCGAGGTGTTGCCGCTGGTGCCGCTGGCCCCGGTGCTGCTGGAGACCGATGCGCTGT GCGTCAACTACATGAAGAAGCGTCCTGGCATGGCGGGCTGGTTCCTCAAGGAAGCATTCCCGGCTGTGAAGGAGGTGAAC CTGCAGTTGCGCGAAGGGGAAACGGTCGGGATCGTAGGTGAGTCGGGCTCAGGCAAGACGACGCTGGCTCACGCCGTGCT CGCGCTCCAGCGCAAGAGTAGCGGCTCGATCCAGTTCCTGGGCCGGAGCTTCGATACCTGCACGGGCAAGGAGCGCAGCG CGTTACGCTCACGGATGCAGGTGGTATTTCAGGACCCGTTCGGGTCGCTGTCTCCCCGGATGACGATCGAGCAGATCGTG GAGGAGGGGCTCGCGCTGCACCAGCCGGGCCTGTCGCGCGAGGCAACGCGTGAGCGCGTGATCGAGGCACTGCGCGAAGT GGGGCTCGACCGCACGGCGCTGGGGCGCTACCCGCACGAGTTCTCGGGTGGCCAGCGGCAACGTATCGCCATTGCCCGTG TGCTGATCCTGAAACCGCAGGTGCTGGTGCTGGATGAGCCGACTTCTGCACTTGACGTGTCGATTCAGCAGCAGGTGCTG GCTCTGCTGTCACAGCTCCAGCACAAGTACAACCTCAGCTATCTCTTTATCAGTCACGACTTGGCGGTGATTCGCGCCAT GGCGCACCGGGTCGTGGTGATGAAGAACGGCGAGGTCGTGGAGTCGGGCGAGACCGAAACGGTGCTCGGCGCACCGCAAC ATTCGTATACACGCAAGCTGATGGCGGCGGCCCAGCTAGGTTCGGCTTGA Protein sequence : MSTAMTFTEPAAVPAPGTKLMCVDRLSVTFGEGEHATRAVREVSFDLRAGERYALVGESGSGKTVTALAMLRLVEDAHYQ GSIRFEGEDLLQVSDREMRRIRGSEIAMIFQEPMTALNPLYTIGNQIVETLALHEGLDRRAARDRAIALLERTGITDAPN RFNSFPHQLSGGQRQRAMIAMALACRPKLLLADEPTTALDVTIRAQILDLLRDLQAEFGMAVMLITHDLNMVRAFAQRVG VMEKGVLVETGETAEVFSNPHHPYTRKLIDSRPRREVLPLVPLAPVLLETDALCVNYMKKRPGMAGWFLKEAFPAVKEVN LQLREGETVGIVGESGSGKTTLAHAVLALQRKSSGSIQFLGRSFDTCTGKERSALRSRMQVVFQDPFGSLSPRMTIEQIV EEGLALHQPGLSREATRERVIEALREVGLDRTALGRYPHEFSGGQRQRIAIARVLILKPQVLVLDEPTSALDVSIQQQVL ALLSQLQHKYNLSYLFISHDLAVIRAMAHRVVVMKNGEVVESGETETVLGAPQHSYTRKLMAAAQLGSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-72 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-72 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-72 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-72 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-82 | 42 |
