|
Name : papD (Rmet_1663) Accession : YP_583813.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : pili assembly chaperone, PapD family Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 1797425 - 1798252 bp Length : 828 bp Strand : - Note : - DNA sequence : ATGTCCCCAATAGGGCGCGACGAACCGAAGATTCGCGCAACTCGAATCAAAAGAATCTGGAATGATTGGCGATTTCCCTC CGGGTTCCATGCACTTAGATTCGTAATTATCTTCGGTGTGATGATTATGCAGGCGTGGAACCCGCAGGCAATTGCTGGTG TGACACCAGAAGTCTCTCGGGTTGTTTACGCAGCTGATGCTGCCGAGCAGTCTCTACAAGTATTTAATGTCAACGATTAT CCAGTTCTTGCTCAGGCCTGGATCGACGACGGCAGGATAGACGCCCTACCACAAGAATCAACCGCGCCGATAGTTGTGAT TCCGCCAATCTTTCGCTTAGGCCGCGGTGATCAGACAAGTCTCCGATTAATAAACTCTGGAGCCGCGCTTCCGTCAGATC GTGAGTCATTATTTTGGCTCAACATTTATGAGATACCTTCAACGCCAAATGGCAGCATGGCAGAGAGCCAGTTGGTTACG GTAACGATGCGAACGCAGATCAAAGTTTTCGTTCGACCCCGTAAGCTTCCCTTTTCATCGGACGAGATCCCAAAGCGCCT TGCGTTCTCTGTCAAGATCATGACTGATGAATCTCTCTTGGAGATTAGGAATCCAACGCCATATTATGTAACATTTTCTA AAATTCAGACCGATATCGGGCGAATATCACAAGTCTCATCTGTAGAAATGATCGCGCCTTACTCTCAGACCATCGCCCAT CTCGGCGAGGTAAAAGGCATCGGTAATTCTGCAAGGATCCGATTCTCTCTAATCGATGATGATGGAAATCCATTTTATGG AGAACGAAATATTGATATTGAAAATTAG Protein sequence : MSPIGRDEPKIRATRIKRIWNDWRFPSGFHALRFVIIFGVMIMQAWNPQAIAGVTPEVSRVVYAADAAEQSLQVFNVNDY PVLAQAWIDDGRIDALPQESTAPIVVIPPIFRLGRGDQTSLRLINSGAALPSDRESLFWLNIYEIPSTPNGSMAESQLVT VTMRTQIKVFVRPRKLPFSSDEIPKRLAFSVKIMTDESLLEIRNPTPYYVTFSKIQTDIGRISQVSSVEMIAPYSQTIAH LGEVKGIGNSARIRFSLIDDDGNPFYGERNIDIEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cupD5 | AAP84167.1 | putative pili assembly chaperone | Not tested | PAPI-1 | Protein | 2e-38 | 45 |
