|
Name : Rmet_1617 (Rmet_1617) Accession : YP_583769.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : putative peptide transport fused subunits of ABC superfamily: ATP-binding components Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1743354 - 1744997 bp Length : 1644 bp Strand : + Note : - DNA sequence : ATGACGCAGACCAATTCCTCCCGACAACCGCTGTTGTCGATCCGCGATCTTTCCATCGCGCTGCCGGCGGGCGGCGACCG CGCGCACGCGGTCAAGGACATCTCGTATGACCTGCACGCTGGTGAAATCCTCTGCATCGTAGGGGAATCCGGCTCGGGAA AATCGATGAGCGCCAACGCGATCATGGGCCTGCTGCCGAGCTACCTGAAGCCTGAGCGCGGCGAGATCCTGTTCCAGGGG CGCGACCTGCTGAAACTGGACGAAACCACGCTGCTCGGCATGCGTGGCAAGGACATGGCAATGGTGTTCCAGGAGCCGTT GTCCGCGCTGAATCCCGTGATGACCGTTGGTGACCAGATCGCCGAAGTCATGCGTGTGCACCGCGCCTATCCGGGCGAAG CCTGCCAGCGGCGCGTGCTGGAACTGCTCGAGTTCGTCGGGTTGCCCGATCCAGCCACGCTGGTGCACAGCTATCCGTTC CGGCTGTCCGGCGGGCAGCGTCAGCGGGTGGTGATCGCGATGGCGCTGGCACTGGAGCCGACGCTGTTGATCGCGGACGA GCCCACCACGGCGCTGGACGTGACCACCCAGGCGCAGATTCTGGCCCTGATCCGGCGCATCCAGGCCGAGAAAGGCATGG GCGTGATGTTCGTTACCCACGACTTCGGCGTCGTGGCCGAGATCGCCGACCGCGTGGCCGTAATGGAAAAGGGCGTGCTG GTCGAGATCGGCACGGCGCAGCAGGTGCTCAATCACCCGCAGCATCCCTATACCCGGCGGCTGATCAGCGCCGTGCCACA TGGCCGCGCGCGCGACGGCGGCCATGCGGACGACCGCACCGTGCTCGACGTGCGAAACCTGCGCAAGACCTACGTTTCCG GTGGCGGGCTGTTCTCGAAGAAGCGCGTGACTCACGCCGTGGATGACGTGTCGTTCAGCGTCAAGCGCGGCGAGACGCTC GGTATCGTGGGCGAATCGGGCTCGGGCAAGTCGACCATCGGCAAATGCCTGCTGCGCCTGACCGGCGTCGACGGTGGCCA GATGCTGTTCGACGGCCAGGACATTGCGCGCCTCTCCGAGCGCCAGTTCCGCCCGATGCGGCGCGACGTGCAGATGATCT TTCAGGACCCGTTTGCGTCGCTCAATCCGCGCCATACGGTTGGCCGCATCATCACCGATGGCCCCGTCGCCACAGGCGTG CCACTGGGCGATGCCCAGGCGCGGGCGCGCGAACTGCTGCAACTGGTTGGACTGGAAGCCTCCGCGTTCGACCGCTATCC AAACCAGTTCTCGGGCGGCCAGCGTCAGCGCATCGGTATCGCCCGGGCCCTGGCGCTGGAGCCGAAGCTGCTGGTGGCCG ACGAATCGGTATCGGCGCTCGATGTCTCCGTACAGGCGCAGGTGCTGCAACTGCTGGCAGACCTGCAGAAGCGGCTCGAT ATCGCGCTGATCTTCATCACGCACGACCTGCGCGTGGCCGCGCAGATCTGCCATCAGGTCATCGTCATGCACCGGGGCCG GGTCGTCGAAGCTGGCCCGCCTTCGCAGATTTTTGATGATCCACAGCACGACTACACCCGTCGCCTGATCGACGCCATTC CCGGCAAGACCTGGGACCCGACGCTGATTCGCGTCGCGGCCTGA Protein sequence : MTQTNSSRQPLLSIRDLSIALPAGGDRAHAVKDISYDLHAGEILCIVGESGSGKSMSANAIMGLLPSYLKPERGEILFQG RDLLKLDETTLLGMRGKDMAMVFQEPLSALNPVMTVGDQIAEVMRVHRAYPGEACQRRVLELLEFVGLPDPATLVHSYPF RLSGGQRQRVVIAMALALEPTLLIADEPTTALDVTTQAQILALIRRIQAEKGMGVMFVTHDFGVVAEIADRVAVMEKGVL VEIGTAQQVLNHPQHPYTRRLISAVPHGRARDGGHADDRTVLDVRNLRKTYVSGGGLFSKKRVTHAVDDVSFSVKRGETL GIVGESGSGKSTIGKCLLRLTGVDGGQMLFDGQDIARLSERQFRPMRRDVQMIFQDPFASLNPRHTVGRIITDGPVATGV PLGDAQARARELLQLVGLEASAFDRYPNQFSGGQRQRIGIARALALEPKLLVADESVSALDVSVQAQVLQLLADLQKRLD IALIFITHDLRVAAQICHQVIVMHRGRVVEAGPPSQIFDDPQHDYTRRLIDAIPGKTWDPTLIRVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-78 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-78 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 7e-96 | 44 |
